Gene : Cagra.1225s0121 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22601:SF22 - OLIGOPEPTIDE TRANSPORTER 6-RELATED Genomic Order:  121
Name:  ? Cagra.1225s0121 Secondary Identifier:  ? PAC:28904109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0121 0.5kb upstream 0.5kb upstream 3247 true Scaffold1225: 436261-439507 Capsella grandiflora
Cagra.1225s0121 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 436261-436760 Capsella grandiflora
Cagra.1225s0121 0.5kb downstream 0.5kb downstream 3247 true Scaffold1225: 436761-440007 Capsella grandiflora
Cagra.1225s0121 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 439508-440007 Capsella grandiflora
Cagra.1225s0121 1.0kb upstream 1.0kb upstream 3747 true Scaffold1225: 435761-439507 Capsella grandiflora
Cagra.1225s0121 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 435761-436760 Capsella grandiflora
Cagra.1225s0121 1.0kb downstream 1.0kb downstream 3747 true Scaffold1225: 436761-440507 Capsella grandiflora
Cagra.1225s0121 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 439508-440507 Capsella grandiflora
Cagra.1225s0121 2.0kb upstream 2.0kb upstream 4747 true Scaffold1225: 434761-439507 Capsella grandiflora
Cagra.1225s0121 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 434761-436760 Capsella grandiflora
Cagra.1225s0121 2.0kb downstream 2.0kb downstream 4747 true Scaffold1225: 436761-441507 Capsella grandiflora
Cagra.1225s0121 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 439508-441507 Capsella grandiflora
Cagra.1225s0121 5.0kb upstream 5.0kb upstream 7747 true Scaffold1225: 431761-439507 Capsella grandiflora
Cagra.1225s0121 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 431761-436760 Capsella grandiflora
Cagra.1225s0121 5.0kb downstream 5.0kb downstream 7747 true Scaffold1225: 436761-444507 Capsella grandiflora
Cagra.1225s0121 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 439508-444507 Capsella grandiflora
Cagra.1225s0121 10.0kb upstream 10.0kb upstream 12747 true Scaffold1225: 426761-439507 Capsella grandiflora
Cagra.1225s0121 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 426761-436760 Capsella grandiflora
Cagra.1225s0121 10.0kb downstream 10.0kb downstream 12747 true Scaffold1225: 436761-449507 Capsella grandiflora
Cagra.1225s0121 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 439508-449507 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370295 5261 Brassicaceae View MSA
123835002 5264 Brassicales-Malvales View MSA
124336629 5266 SBM View MSA
124237972 5268 Malvidae View MSA
124050403 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain