Gene : Cagra.1226s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21576:SF19 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  2
Name:  ? Cagra.1226s0002 Secondary Identifier:  ? PAC:28916577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0002 0.5kb upstream 0.5kb upstream 6454 true Scaffold1226: 8532-14985 Capsella grandiflora
Cagra.1226s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 8532-9031 Capsella grandiflora
Cagra.1226s0002 0.5kb downstream 0.5kb downstream 6454 true Scaffold1226: 9032-15485 Capsella grandiflora
Cagra.1226s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 14986-15485 Capsella grandiflora
Cagra.1226s0002 1.0kb upstream 1.0kb upstream 6954 true Scaffold1226: 8032-14985 Capsella grandiflora
Cagra.1226s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 8032-9031 Capsella grandiflora
Cagra.1226s0002 1.0kb downstream 1.0kb downstream 6954 true Scaffold1226: 9032-15985 Capsella grandiflora
Cagra.1226s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 14986-15985 Capsella grandiflora
Cagra.1226s0002 2.0kb upstream 2.0kb upstream 7954 true Scaffold1226: 7032-14985 Capsella grandiflora
Cagra.1226s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 7032-9031 Capsella grandiflora
Cagra.1226s0002 2.0kb downstream 2.0kb downstream 7954 true Scaffold1226: 9032-16985 Capsella grandiflora
Cagra.1226s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 14986-16985 Capsella grandiflora
Cagra.1226s0002 5.0kb upstream 5.0kb upstream 10954 true Scaffold1226: 4032-14985 Capsella grandiflora
Cagra.1226s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 4032-9031 Capsella grandiflora
Cagra.1226s0002 5.0kb downstream 5.0kb downstream 10954 true Scaffold1226: 9032-19985 Capsella grandiflora
Cagra.1226s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 14986-19985 Capsella grandiflora
Cagra.1226s0002 10.0kb upstream 10.0kb upstream 14985 true Scaffold1226: 1-14985 Capsella grandiflora
Cagra.1226s0002 10.0kb upstream 10.0kb upstream 9031 false Scaffold1226: 1-9031 Capsella grandiflora
Cagra.1226s0002 10.0kb downstream 10.0kb downstream 15954 true Scaffold1226: 9032-24985 Capsella grandiflora
Cagra.1226s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 14986-24985 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363754 5261 Brassicaceae View MSA
123830038 5264 Brassicales-Malvales View MSA
124342888 5266 SBM View MSA
124241561 5268 Malvidae View MSA
124064000 5270 Rosid View MSA
123738418 5271 Pentapetalae View MSA
122786075 5272 Eudicot View MSA
122044020 5273 Angiosperm View MSA
121310227 5274 Embryophyte View MSA
123347775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain