Gene : Cagra.1226s0025 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10994:SF78 - RETICULON-LIKE PROTEIN B1-RELATED Genomic Order:  25
Name:  ? Cagra.1226s0025 Secondary Identifier:  ? PAC:28916481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0025 0.5kb upstream 0.5kb upstream 2474 true Scaffold1226: 101707-104180 Capsella grandiflora
Cagra.1226s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 101707-102206 Capsella grandiflora
Cagra.1226s0025 0.5kb downstream 0.5kb downstream 2474 true Scaffold1226: 102207-104680 Capsella grandiflora
Cagra.1226s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 104181-104680 Capsella grandiflora
Cagra.1226s0025 1.0kb upstream 1.0kb upstream 2974 true Scaffold1226: 101207-104180 Capsella grandiflora
Cagra.1226s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 101207-102206 Capsella grandiflora
Cagra.1226s0025 1.0kb downstream 1.0kb downstream 2974 true Scaffold1226: 102207-105180 Capsella grandiflora
Cagra.1226s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 104181-105180 Capsella grandiflora
Cagra.1226s0025 2.0kb upstream 2.0kb upstream 3974 true Scaffold1226: 100207-104180 Capsella grandiflora
Cagra.1226s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 100207-102206 Capsella grandiflora
Cagra.1226s0025 2.0kb downstream 2.0kb downstream 3974 true Scaffold1226: 102207-106180 Capsella grandiflora
Cagra.1226s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 104181-106180 Capsella grandiflora
Cagra.1226s0025 5.0kb upstream 5.0kb upstream 6974 true Scaffold1226: 97207-104180 Capsella grandiflora
Cagra.1226s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 97207-102206 Capsella grandiflora
Cagra.1226s0025 5.0kb downstream 5.0kb downstream 6974 true Scaffold1226: 102207-109180 Capsella grandiflora
Cagra.1226s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 104181-109180 Capsella grandiflora
Cagra.1226s0025 10.0kb upstream 10.0kb upstream 11974 true Scaffold1226: 92207-104180 Capsella grandiflora
Cagra.1226s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 92207-102206 Capsella grandiflora
Cagra.1226s0025 10.0kb downstream 10.0kb downstream 11974 true Scaffold1226: 102207-114180 Capsella grandiflora
Cagra.1226s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 104181-114180 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366047 5261 Brassicaceae View MSA
123799096 5264 Brassicales-Malvales View MSA
124349804 5266 SBM View MSA
124252411 5268 Malvidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain