Gene : Cagra.1226s0061 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  61
Name:  ? Cagra.1226s0061 Secondary Identifier:  ? PAC:28916528
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0061 0.5kb upstream 0.5kb upstream 3102 true Scaffold1226: 246281-249382 Capsella grandiflora
Cagra.1226s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 246281-246780 Capsella grandiflora
Cagra.1226s0061 0.5kb downstream 0.5kb downstream 3102 true Scaffold1226: 246781-249882 Capsella grandiflora
Cagra.1226s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 249383-249882 Capsella grandiflora
Cagra.1226s0061 1.0kb upstream 1.0kb upstream 3602 true Scaffold1226: 245781-249382 Capsella grandiflora
Cagra.1226s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 245781-246780 Capsella grandiflora
Cagra.1226s0061 1.0kb downstream 1.0kb downstream 3602 true Scaffold1226: 246781-250382 Capsella grandiflora
Cagra.1226s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 249383-250382 Capsella grandiflora
Cagra.1226s0061 2.0kb upstream 2.0kb upstream 4602 true Scaffold1226: 244781-249382 Capsella grandiflora
Cagra.1226s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 244781-246780 Capsella grandiflora
Cagra.1226s0061 2.0kb downstream 2.0kb downstream 4602 true Scaffold1226: 246781-251382 Capsella grandiflora
Cagra.1226s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 249383-251382 Capsella grandiflora
Cagra.1226s0061 5.0kb upstream 5.0kb upstream 7602 true Scaffold1226: 241781-249382 Capsella grandiflora
Cagra.1226s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 241781-246780 Capsella grandiflora
Cagra.1226s0061 5.0kb downstream 5.0kb downstream 7602 true Scaffold1226: 246781-254382 Capsella grandiflora
Cagra.1226s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 249383-254382 Capsella grandiflora
Cagra.1226s0061 10.0kb upstream 10.0kb upstream 12602 true Scaffold1226: 236781-249382 Capsella grandiflora
Cagra.1226s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 236781-246780 Capsella grandiflora
Cagra.1226s0061 10.0kb downstream 10.0kb downstream 12602 true Scaffold1226: 246781-259382 Capsella grandiflora
Cagra.1226s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 249383-259382 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366412 5261 Brassicaceae View MSA
123828986 5264 Brassicales-Malvales View MSA
124321568 5266 SBM View MSA
124241982 5268 Malvidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain