Gene : Cagra.1226s0071 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24320:SF81 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  71
Name:  ? Cagra.1226s0071 Secondary Identifier:  ? PAC:28916495
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0071 0.5kb upstream 0.5kb upstream 3329 true Scaffold1226: 295644-298972 Capsella grandiflora
Cagra.1226s0071 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 295644-296143 Capsella grandiflora
Cagra.1226s0071 0.5kb downstream 0.5kb downstream 3329 true Scaffold1226: 296144-299472 Capsella grandiflora
Cagra.1226s0071 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 298973-299472 Capsella grandiflora
Cagra.1226s0071 1.0kb upstream 1.0kb upstream 3829 true Scaffold1226: 295144-298972 Capsella grandiflora
Cagra.1226s0071 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 295144-296143 Capsella grandiflora
Cagra.1226s0071 1.0kb downstream 1.0kb downstream 3829 true Scaffold1226: 296144-299972 Capsella grandiflora
Cagra.1226s0071 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 298973-299972 Capsella grandiflora
Cagra.1226s0071 2.0kb upstream 2.0kb upstream 4829 true Scaffold1226: 294144-298972 Capsella grandiflora
Cagra.1226s0071 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 294144-296143 Capsella grandiflora
Cagra.1226s0071 2.0kb downstream 2.0kb downstream 4829 true Scaffold1226: 296144-300972 Capsella grandiflora
Cagra.1226s0071 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 298973-300972 Capsella grandiflora
Cagra.1226s0071 5.0kb upstream 5.0kb upstream 7829 true Scaffold1226: 291144-298972 Capsella grandiflora
Cagra.1226s0071 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 291144-296143 Capsella grandiflora
Cagra.1226s0071 5.0kb downstream 5.0kb downstream 7829 true Scaffold1226: 296144-303972 Capsella grandiflora
Cagra.1226s0071 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 298973-303972 Capsella grandiflora
Cagra.1226s0071 10.0kb upstream 10.0kb upstream 12829 true Scaffold1226: 286144-298972 Capsella grandiflora
Cagra.1226s0071 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 286144-296143 Capsella grandiflora
Cagra.1226s0071 10.0kb downstream 10.0kb downstream 12829 true Scaffold1226: 296144-308972 Capsella grandiflora
Cagra.1226s0071 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 298973-308972 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365248 5261 Brassicaceae View MSA
123831890 5264 Brassicales-Malvales View MSA
124336422 5266 SBM View MSA
124243472 5268 Malvidae View MSA
124064586 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain