Gene : Cagra.1226s0073 C. grandiflora v1.1
Defline:  (1 of 2) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  73
Name:  ? Cagra.1226s0073 Secondary Identifier:  ? PAC:28916521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0073 0.5kb upstream 0.5kb upstream 1428 true Scaffold1226: 309862-311289 Capsella grandiflora
Cagra.1226s0073 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 309862-310361 Capsella grandiflora
Cagra.1226s0073 0.5kb downstream 0.5kb downstream 1428 true Scaffold1226: 310362-311789 Capsella grandiflora
Cagra.1226s0073 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 311290-311789 Capsella grandiflora
Cagra.1226s0073 1.0kb upstream 1.0kb upstream 1928 true Scaffold1226: 309362-311289 Capsella grandiflora
Cagra.1226s0073 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 309362-310361 Capsella grandiflora
Cagra.1226s0073 1.0kb downstream 1.0kb downstream 1928 true Scaffold1226: 310362-312289 Capsella grandiflora
Cagra.1226s0073 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 311290-312289 Capsella grandiflora
Cagra.1226s0073 2.0kb upstream 2.0kb upstream 2928 true Scaffold1226: 308362-311289 Capsella grandiflora
Cagra.1226s0073 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 308362-310361 Capsella grandiflora
Cagra.1226s0073 2.0kb downstream 2.0kb downstream 2928 true Scaffold1226: 310362-313289 Capsella grandiflora
Cagra.1226s0073 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 311290-313289 Capsella grandiflora
Cagra.1226s0073 5.0kb upstream 5.0kb upstream 5928 true Scaffold1226: 305362-311289 Capsella grandiflora
Cagra.1226s0073 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 305362-310361 Capsella grandiflora
Cagra.1226s0073 5.0kb downstream 5.0kb downstream 5928 true Scaffold1226: 310362-316289 Capsella grandiflora
Cagra.1226s0073 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 311290-316289 Capsella grandiflora
Cagra.1226s0073 10.0kb upstream 10.0kb upstream 10928 true Scaffold1226: 300362-311289 Capsella grandiflora
Cagra.1226s0073 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 300362-310361 Capsella grandiflora
Cagra.1226s0073 10.0kb downstream 10.0kb downstream 10928 true Scaffold1226: 310362-321289 Capsella grandiflora
Cagra.1226s0073 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 311290-321289 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361092 5261 Brassicaceae View MSA
123837747 5264 Brassicales-Malvales View MSA
124343254 5266 SBM View MSA
124249871 5268 Malvidae View MSA
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain