Gene : Cagra.1225s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19282:SF227 - TETRASPANIN-18-RELATED Genomic Order:  12
Name:  ? Cagra.1225s0012 Secondary Identifier:  ? PAC:28904154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0012 0.5kb upstream 0.5kb upstream 3096 true Scaffold1225: 42995-46090 Capsella grandiflora
Cagra.1225s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 42995-43494 Capsella grandiflora
Cagra.1225s0012 0.5kb downstream 0.5kb downstream 3096 true Scaffold1225: 43495-46590 Capsella grandiflora
Cagra.1225s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 46091-46590 Capsella grandiflora
Cagra.1225s0012 1.0kb upstream 1.0kb upstream 3596 true Scaffold1225: 42495-46090 Capsella grandiflora
Cagra.1225s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 42495-43494 Capsella grandiflora
Cagra.1225s0012 1.0kb downstream 1.0kb downstream 3596 true Scaffold1225: 43495-47090 Capsella grandiflora
Cagra.1225s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 46091-47090 Capsella grandiflora
Cagra.1225s0012 2.0kb upstream 2.0kb upstream 4596 true Scaffold1225: 41495-46090 Capsella grandiflora
Cagra.1225s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 41495-43494 Capsella grandiflora
Cagra.1225s0012 2.0kb downstream 2.0kb downstream 4596 true Scaffold1225: 43495-48090 Capsella grandiflora
Cagra.1225s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 46091-48090 Capsella grandiflora
Cagra.1225s0012 5.0kb upstream 5.0kb upstream 7596 true Scaffold1225: 38495-46090 Capsella grandiflora
Cagra.1225s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 38495-43494 Capsella grandiflora
Cagra.1225s0012 5.0kb downstream 5.0kb downstream 7596 true Scaffold1225: 43495-51090 Capsella grandiflora
Cagra.1225s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 46091-51090 Capsella grandiflora
Cagra.1225s0012 10.0kb upstream 10.0kb upstream 12596 true Scaffold1225: 33495-46090 Capsella grandiflora
Cagra.1225s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 33495-43494 Capsella grandiflora
Cagra.1225s0012 10.0kb downstream 10.0kb downstream 12596 true Scaffold1225: 43495-56090 Capsella grandiflora
Cagra.1225s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 46091-56090 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369953 5261 Brassicaceae View MSA
123837853 5264 Brassicales-Malvales View MSA
124337552 5266 SBM View MSA
124253906 5268 Malvidae View MSA
124063640 5270 Rosid View MSA
123743956 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain