Gene : Cagra.1225s0023 C. grandiflora v1.1
Defline:  (1 of 4) 4.1.1.25 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase Genomic Order:  23
Name:  ? Cagra.1225s0023 Secondary Identifier:  ? PAC:28904145
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6802 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0023 0.5kb upstream 0.5kb upstream 3852 true Scaffold1225: 97982-101833 Capsella grandiflora
Cagra.1225s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 101334-101833 Capsella grandiflora
Cagra.1225s0023 0.5kb downstream 0.5kb downstream 3852 true Scaffold1225: 97482-101333 Capsella grandiflora
Cagra.1225s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 97482-97981 Capsella grandiflora
Cagra.1225s0023 1.0kb upstream 1.0kb upstream 4352 true Scaffold1225: 97982-102333 Capsella grandiflora
Cagra.1225s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 101334-102333 Capsella grandiflora
Cagra.1225s0023 1.0kb downstream 1.0kb downstream 4352 true Scaffold1225: 96982-101333 Capsella grandiflora
Cagra.1225s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 96982-97981 Capsella grandiflora
Cagra.1225s0023 2.0kb upstream 2.0kb upstream 5352 true Scaffold1225: 97982-103333 Capsella grandiflora
Cagra.1225s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 101334-103333 Capsella grandiflora
Cagra.1225s0023 2.0kb downstream 2.0kb downstream 5352 true Scaffold1225: 95982-101333 Capsella grandiflora
Cagra.1225s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 95982-97981 Capsella grandiflora
Cagra.1225s0023 5.0kb upstream 5.0kb upstream 8352 true Scaffold1225: 97982-106333 Capsella grandiflora
Cagra.1225s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 101334-106333 Capsella grandiflora
Cagra.1225s0023 5.0kb downstream 5.0kb downstream 8352 true Scaffold1225: 92982-101333 Capsella grandiflora
Cagra.1225s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 92982-97981 Capsella grandiflora
Cagra.1225s0023 10.0kb upstream 10.0kb upstream 13352 true Scaffold1225: 97982-111333 Capsella grandiflora
Cagra.1225s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 101334-111333 Capsella grandiflora
Cagra.1225s0023 10.0kb downstream 10.0kb downstream 13352 true Scaffold1225: 87982-101333 Capsella grandiflora
Cagra.1225s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 87982-97981 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374031 5261 Brassicaceae View MSA
123800671 5264 Brassicales-Malvales View MSA
124351475 5266 SBM View MSA
124253031 5268 Malvidae View MSA
124071819 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain