Gene : Cagra.1225s0043 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31621:SF0 - DUF679 DOMAIN MEMBRANE PROTEIN 7 Genomic Order:  43
Name:  ? Cagra.1225s0043 Secondary Identifier:  ? PAC:28904185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0043 0.5kb upstream 0.5kb upstream 1182 true Scaffold1225: 181450-182631 Capsella grandiflora
Cagra.1225s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 181450-181949 Capsella grandiflora
Cagra.1225s0043 0.5kb downstream 0.5kb downstream 1182 true Scaffold1225: 181950-183131 Capsella grandiflora
Cagra.1225s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 182632-183131 Capsella grandiflora
Cagra.1225s0043 1.0kb upstream 1.0kb upstream 1682 true Scaffold1225: 180950-182631 Capsella grandiflora
Cagra.1225s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 180950-181949 Capsella grandiflora
Cagra.1225s0043 1.0kb downstream 1.0kb downstream 1682 true Scaffold1225: 181950-183631 Capsella grandiflora
Cagra.1225s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 182632-183631 Capsella grandiflora
Cagra.1225s0043 2.0kb upstream 2.0kb upstream 2682 true Scaffold1225: 179950-182631 Capsella grandiflora
Cagra.1225s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 179950-181949 Capsella grandiflora
Cagra.1225s0043 2.0kb downstream 2.0kb downstream 2682 true Scaffold1225: 181950-184631 Capsella grandiflora
Cagra.1225s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 182632-184631 Capsella grandiflora
Cagra.1225s0043 5.0kb upstream 5.0kb upstream 5682 true Scaffold1225: 176950-182631 Capsella grandiflora
Cagra.1225s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 176950-181949 Capsella grandiflora
Cagra.1225s0043 5.0kb downstream 5.0kb downstream 5682 true Scaffold1225: 181950-187631 Capsella grandiflora
Cagra.1225s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 182632-187631 Capsella grandiflora
Cagra.1225s0043 10.0kb upstream 10.0kb upstream 10682 true Scaffold1225: 171950-182631 Capsella grandiflora
Cagra.1225s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 171950-181949 Capsella grandiflora
Cagra.1225s0043 10.0kb downstream 10.0kb downstream 10682 true Scaffold1225: 181950-192631 Capsella grandiflora
Cagra.1225s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 182632-192631 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378680 5261 Brassicaceae View MSA
123833035 5264 Brassicales-Malvales View MSA
124342743 5266 SBM View MSA
124237126 5268 Malvidae View MSA
124071441 5270 Rosid View MSA
123744074 5271 Pentapetalae View MSA
122789461 5272 Eudicot View MSA
122044570 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain