Gene : Cagra.1225s0049 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10994:SF61 - RETICULON-LIKE PROTEIN Genomic Order:  49
Name:  ? Cagra.1225s0049 Secondary Identifier:  ? PAC:28904175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0049 0.5kb upstream 0.5kb upstream 2579 true Scaffold1225: 198556-201134 Capsella grandiflora
Cagra.1225s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 200635-201134 Capsella grandiflora
Cagra.1225s0049 0.5kb downstream 0.5kb downstream 2579 true Scaffold1225: 198056-200634 Capsella grandiflora
Cagra.1225s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 198056-198555 Capsella grandiflora
Cagra.1225s0049 1.0kb upstream 1.0kb upstream 3079 true Scaffold1225: 198556-201634 Capsella grandiflora
Cagra.1225s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 200635-201634 Capsella grandiflora
Cagra.1225s0049 1.0kb downstream 1.0kb downstream 3079 true Scaffold1225: 197556-200634 Capsella grandiflora
Cagra.1225s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 197556-198555 Capsella grandiflora
Cagra.1225s0049 2.0kb upstream 2.0kb upstream 4079 true Scaffold1225: 198556-202634 Capsella grandiflora
Cagra.1225s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 200635-202634 Capsella grandiflora
Cagra.1225s0049 2.0kb downstream 2.0kb downstream 4079 true Scaffold1225: 196556-200634 Capsella grandiflora
Cagra.1225s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 196556-198555 Capsella grandiflora
Cagra.1225s0049 5.0kb upstream 5.0kb upstream 7079 true Scaffold1225: 198556-205634 Capsella grandiflora
Cagra.1225s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 200635-205634 Capsella grandiflora
Cagra.1225s0049 5.0kb downstream 5.0kb downstream 7079 true Scaffold1225: 193556-200634 Capsella grandiflora
Cagra.1225s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 193556-198555 Capsella grandiflora
Cagra.1225s0049 10.0kb upstream 10.0kb upstream 12079 true Scaffold1225: 198556-210634 Capsella grandiflora
Cagra.1225s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 200635-210634 Capsella grandiflora
Cagra.1225s0049 10.0kb downstream 10.0kb downstream 12079 true Scaffold1225: 188556-200634 Capsella grandiflora
Cagra.1225s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 188556-198555 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381114 5261 Brassicaceae View MSA
123830467 5264 Brassicales-Malvales View MSA
124345713 5266 SBM View MSA
124243328 5268 Malvidae View MSA
124065493 5270 Rosid View MSA
123740273 5271 Pentapetalae View MSA
122786766 5272 Eudicot View MSA
122045341 5273 Angiosperm View MSA
121349821 5274 Embryophyte View MSA
123424485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain