Gene : Cagra.1225s0091 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  91
Name:  ? Cagra.1225s0091 Secondary Identifier:  ? PAC:28904121
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUCOSE1PMETAB-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-621 Capsella grandiflora pathologic  
Cgrandiflora PWY-7238 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0091 0.5kb upstream 0.5kb upstream 2975 true Scaffold1225: 314999-317973 Capsella grandiflora
Cagra.1225s0091 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 317474-317973 Capsella grandiflora
Cagra.1225s0091 0.5kb downstream 0.5kb downstream 2975 true Scaffold1225: 314499-317473 Capsella grandiflora
Cagra.1225s0091 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 314499-314998 Capsella grandiflora
Cagra.1225s0091 1.0kb upstream 1.0kb upstream 3475 true Scaffold1225: 314999-318473 Capsella grandiflora
Cagra.1225s0091 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 317474-318473 Capsella grandiflora
Cagra.1225s0091 1.0kb downstream 1.0kb downstream 3475 true Scaffold1225: 313999-317473 Capsella grandiflora
Cagra.1225s0091 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 313999-314998 Capsella grandiflora
Cagra.1225s0091 2.0kb upstream 2.0kb upstream 4475 true Scaffold1225: 314999-319473 Capsella grandiflora
Cagra.1225s0091 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 317474-319473 Capsella grandiflora
Cagra.1225s0091 2.0kb downstream 2.0kb downstream 4475 true Scaffold1225: 312999-317473 Capsella grandiflora
Cagra.1225s0091 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 312999-314998 Capsella grandiflora
Cagra.1225s0091 5.0kb upstream 5.0kb upstream 7475 true Scaffold1225: 314999-322473 Capsella grandiflora
Cagra.1225s0091 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 317474-322473 Capsella grandiflora
Cagra.1225s0091 5.0kb downstream 5.0kb downstream 7475 true Scaffold1225: 309999-317473 Capsella grandiflora
Cagra.1225s0091 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 309999-314998 Capsella grandiflora
Cagra.1225s0091 10.0kb upstream 10.0kb upstream 12475 true Scaffold1225: 314999-327473 Capsella grandiflora
Cagra.1225s0091 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 317474-327473 Capsella grandiflora
Cagra.1225s0091 10.0kb downstream 10.0kb downstream 12475 true Scaffold1225: 304999-317473 Capsella grandiflora
Cagra.1225s0091 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 304999-314998 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374255 5261 Brassicaceae View MSA
123800714 5264 Brassicales-Malvales View MSA
124346939 5266 SBM View MSA
124240736 5268 Malvidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain