Gene : Cagra.1225s0096 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  96
Name:  ? Cagra.1225s0096 Secondary Identifier:  ? PAC:28904135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0096 0.5kb upstream 0.5kb upstream 2590 true Scaffold1225: 332540-335129 Capsella grandiflora
Cagra.1225s0096 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 332540-333039 Capsella grandiflora
Cagra.1225s0096 0.5kb downstream 0.5kb downstream 2590 true Scaffold1225: 333040-335629 Capsella grandiflora
Cagra.1225s0096 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 335130-335629 Capsella grandiflora
Cagra.1225s0096 1.0kb upstream 1.0kb upstream 3090 true Scaffold1225: 332040-335129 Capsella grandiflora
Cagra.1225s0096 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 332040-333039 Capsella grandiflora
Cagra.1225s0096 1.0kb downstream 1.0kb downstream 3090 true Scaffold1225: 333040-336129 Capsella grandiflora
Cagra.1225s0096 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 335130-336129 Capsella grandiflora
Cagra.1225s0096 2.0kb upstream 2.0kb upstream 4090 true Scaffold1225: 331040-335129 Capsella grandiflora
Cagra.1225s0096 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 331040-333039 Capsella grandiflora
Cagra.1225s0096 2.0kb downstream 2.0kb downstream 4090 true Scaffold1225: 333040-337129 Capsella grandiflora
Cagra.1225s0096 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 335130-337129 Capsella grandiflora
Cagra.1225s0096 5.0kb upstream 5.0kb upstream 7090 true Scaffold1225: 328040-335129 Capsella grandiflora
Cagra.1225s0096 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 328040-333039 Capsella grandiflora
Cagra.1225s0096 5.0kb downstream 5.0kb downstream 7090 true Scaffold1225: 333040-340129 Capsella grandiflora
Cagra.1225s0096 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 335130-340129 Capsella grandiflora
Cagra.1225s0096 10.0kb upstream 10.0kb upstream 12090 true Scaffold1225: 323040-335129 Capsella grandiflora
Cagra.1225s0096 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 323040-333039 Capsella grandiflora
Cagra.1225s0096 10.0kb downstream 10.0kb downstream 12090 true Scaffold1225: 333040-345129 Capsella grandiflora
Cagra.1225s0096 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 335130-345129 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369300 5261 Brassicaceae View MSA
123827422 5264 Brassicales-Malvales View MSA
124341116 5266 SBM View MSA
124239899 5268 Malvidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain