Gene : Cagra.1225s0092 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  92
Name:  ? Cagra.1225s0092 Secondary Identifier:  ? PAC:28904193
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0092 0.5kb upstream 0.5kb upstream 2013 true Scaffold1225: 317155-319167 Capsella grandiflora
Cagra.1225s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 317155-317654 Capsella grandiflora
Cagra.1225s0092 0.5kb downstream 0.5kb downstream 2013 true Scaffold1225: 317655-319667 Capsella grandiflora
Cagra.1225s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 319168-319667 Capsella grandiflora
Cagra.1225s0092 1.0kb upstream 1.0kb upstream 2513 true Scaffold1225: 316655-319167 Capsella grandiflora
Cagra.1225s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 316655-317654 Capsella grandiflora
Cagra.1225s0092 1.0kb downstream 1.0kb downstream 2513 true Scaffold1225: 317655-320167 Capsella grandiflora
Cagra.1225s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 319168-320167 Capsella grandiflora
Cagra.1225s0092 2.0kb upstream 2.0kb upstream 3513 true Scaffold1225: 315655-319167 Capsella grandiflora
Cagra.1225s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 315655-317654 Capsella grandiflora
Cagra.1225s0092 2.0kb downstream 2.0kb downstream 3513 true Scaffold1225: 317655-321167 Capsella grandiflora
Cagra.1225s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 319168-321167 Capsella grandiflora
Cagra.1225s0092 5.0kb upstream 5.0kb upstream 6513 true Scaffold1225: 312655-319167 Capsella grandiflora
Cagra.1225s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 312655-317654 Capsella grandiflora
Cagra.1225s0092 5.0kb downstream 5.0kb downstream 6513 true Scaffold1225: 317655-324167 Capsella grandiflora
Cagra.1225s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 319168-324167 Capsella grandiflora
Cagra.1225s0092 10.0kb upstream 10.0kb upstream 11513 true Scaffold1225: 307655-319167 Capsella grandiflora
Cagra.1225s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 307655-317654 Capsella grandiflora
Cagra.1225s0092 10.0kb downstream 10.0kb downstream 11513 true Scaffold1225: 317655-329167 Capsella grandiflora
Cagra.1225s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 319168-329167 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378831 5261 Brassicaceae View MSA
123836054 5264 Brassicales-Malvales View MSA
124340076 5266 SBM View MSA
124241119 5268 Malvidae View MSA
124068898 5270 Rosid View MSA
123741112 5271 Pentapetalae View MSA
122785907 5272 Eudicot View MSA
122042170 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain