Gene : Cagra.1225s0108 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12356:SF3 - NUCLEAR MIGRATION PROTEIN NUDC Genomic Order:  108
Name:  ? Cagra.1225s0108 Secondary Identifier:  ? PAC:28904078
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0108 0.5kb upstream 0.5kb upstream 1888 true Scaffold1225: 382320-384207 Capsella grandiflora
Cagra.1225s0108 0.5kb upstream 0.5kb upstream 500 false Scaffold1225: 383708-384207 Capsella grandiflora
Cagra.1225s0108 0.5kb downstream 0.5kb downstream 1888 true Scaffold1225: 381820-383707 Capsella grandiflora
Cagra.1225s0108 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 381820-382319 Capsella grandiflora
Cagra.1225s0108 1.0kb upstream 1.0kb upstream 2388 true Scaffold1225: 382320-384707 Capsella grandiflora
Cagra.1225s0108 1.0kb upstream 1.0kb upstream 1000 false Scaffold1225: 383708-384707 Capsella grandiflora
Cagra.1225s0108 1.0kb downstream 1.0kb downstream 2388 true Scaffold1225: 381320-383707 Capsella grandiflora
Cagra.1225s0108 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 381320-382319 Capsella grandiflora
Cagra.1225s0108 2.0kb upstream 2.0kb upstream 3388 true Scaffold1225: 382320-385707 Capsella grandiflora
Cagra.1225s0108 2.0kb upstream 2.0kb upstream 2000 false Scaffold1225: 383708-385707 Capsella grandiflora
Cagra.1225s0108 2.0kb downstream 2.0kb downstream 3388 true Scaffold1225: 380320-383707 Capsella grandiflora
Cagra.1225s0108 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 380320-382319 Capsella grandiflora
Cagra.1225s0108 5.0kb upstream 5.0kb upstream 6388 true Scaffold1225: 382320-388707 Capsella grandiflora
Cagra.1225s0108 5.0kb upstream 5.0kb upstream 5000 false Scaffold1225: 383708-388707 Capsella grandiflora
Cagra.1225s0108 5.0kb downstream 5.0kb downstream 6388 true Scaffold1225: 377320-383707 Capsella grandiflora
Cagra.1225s0108 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 377320-382319 Capsella grandiflora
Cagra.1225s0108 10.0kb upstream 10.0kb upstream 11388 true Scaffold1225: 382320-393707 Capsella grandiflora
Cagra.1225s0108 10.0kb upstream 10.0kb upstream 10000 false Scaffold1225: 383708-393707 Capsella grandiflora
Cagra.1225s0108 10.0kb downstream 10.0kb downstream 11388 true Scaffold1225: 372320-383707 Capsella grandiflora
Cagra.1225s0108 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 372320-382319 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371809 5261 Brassicaceae View MSA
123800238 5264 Brassicales-Malvales View MSA
124297677 5266 SBM View MSA
124251491 5268 Malvidae View MSA
124064550 5270 Rosid View MSA
123752804 5271 Pentapetalae View MSA
122796165 5272 Eudicot View MSA
122044213 5273 Angiosperm View MSA
121350395 5274 Embryophyte View MSA
123424343 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain