Gene : Cagra.1202s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10556:SF28 - SC2 Genomic Order:  13
Name:  ? Cagra.1202s0013 Secondary Identifier:  ? PAC:28910222
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1202s0013 0.5kb upstream 0.5kb upstream 2595 true Scaffold1202: 48987-51581 Capsella grandiflora
Cagra.1202s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1202: 48987-49486 Capsella grandiflora
Cagra.1202s0013 0.5kb downstream 0.5kb downstream 2595 true Scaffold1202: 49487-52081 Capsella grandiflora
Cagra.1202s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1202: 51582-52081 Capsella grandiflora
Cagra.1202s0013 1.0kb upstream 1.0kb upstream 3095 true Scaffold1202: 48487-51581 Capsella grandiflora
Cagra.1202s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1202: 48487-49486 Capsella grandiflora
Cagra.1202s0013 1.0kb downstream 1.0kb downstream 3095 true Scaffold1202: 49487-52581 Capsella grandiflora
Cagra.1202s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1202: 51582-52581 Capsella grandiflora
Cagra.1202s0013 2.0kb upstream 2.0kb upstream 4095 true Scaffold1202: 47487-51581 Capsella grandiflora
Cagra.1202s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1202: 47487-49486 Capsella grandiflora
Cagra.1202s0013 2.0kb downstream 2.0kb downstream 4095 true Scaffold1202: 49487-53581 Capsella grandiflora
Cagra.1202s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1202: 51582-53581 Capsella grandiflora
Cagra.1202s0013 5.0kb upstream 5.0kb upstream 7095 true Scaffold1202: 44487-51581 Capsella grandiflora
Cagra.1202s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1202: 44487-49486 Capsella grandiflora
Cagra.1202s0013 5.0kb downstream 5.0kb downstream 7095 true Scaffold1202: 49487-56581 Capsella grandiflora
Cagra.1202s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1202: 51582-56581 Capsella grandiflora
Cagra.1202s0013 10.0kb upstream 10.0kb upstream 12095 true Scaffold1202: 39487-51581 Capsella grandiflora
Cagra.1202s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1202: 39487-49486 Capsella grandiflora
Cagra.1202s0013 10.0kb downstream 10.0kb downstream 8125 true Scaffold1202: 49487-57611 Capsella grandiflora
Cagra.1202s0013 10.0kb downstream 10.0kb downstream 6030 false Scaffold1202: 51582-57611 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372043 5261 Brassicaceae View MSA
123833669 5264 Brassicales-Malvales View MSA
124342749 5266 SBM View MSA
124241382 5268 Malvidae View MSA
124066055 5270 Rosid View MSA
123738420 5271 Pentapetalae View MSA
122787535 5272 Eudicot View MSA
122041851 5273 Angiosperm View MSA
121344061 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain