Gene : Cagra.1211s0012 C. grandiflora v1.1
Defline:  (1 of 3) 3.1.3.67 - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  12
Name:  ? Cagra.1211s0012 Secondary Identifier:  ? PAC:28915406
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6368 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1211s0012 0.5kb upstream 0.5kb upstream 4826 true Scaffold1211: 56643-61468 Capsella grandiflora
Cagra.1211s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1211: 60969-61468 Capsella grandiflora
Cagra.1211s0012 0.5kb downstream 0.5kb downstream 4826 true Scaffold1211: 56143-60968 Capsella grandiflora
Cagra.1211s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1211: 56143-56642 Capsella grandiflora
Cagra.1211s0012 1.0kb upstream 1.0kb upstream 5326 true Scaffold1211: 56643-61968 Capsella grandiflora
Cagra.1211s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1211: 60969-61968 Capsella grandiflora
Cagra.1211s0012 1.0kb downstream 1.0kb downstream 5326 true Scaffold1211: 55643-60968 Capsella grandiflora
Cagra.1211s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1211: 55643-56642 Capsella grandiflora
Cagra.1211s0012 2.0kb upstream 2.0kb upstream 6326 true Scaffold1211: 56643-62968 Capsella grandiflora
Cagra.1211s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1211: 60969-62968 Capsella grandiflora
Cagra.1211s0012 2.0kb downstream 2.0kb downstream 6326 true Scaffold1211: 54643-60968 Capsella grandiflora
Cagra.1211s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1211: 54643-56642 Capsella grandiflora
Cagra.1211s0012 5.0kb upstream 5.0kb upstream 9326 true Scaffold1211: 56643-65968 Capsella grandiflora
Cagra.1211s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1211: 60969-65968 Capsella grandiflora
Cagra.1211s0012 5.0kb downstream 5.0kb downstream 9326 true Scaffold1211: 51643-60968 Capsella grandiflora
Cagra.1211s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1211: 51643-56642 Capsella grandiflora
Cagra.1211s0012 10.0kb upstream 10.0kb upstream 14326 true Scaffold1211: 56643-70968 Capsella grandiflora
Cagra.1211s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1211: 60969-70968 Capsella grandiflora
Cagra.1211s0012 10.0kb downstream 10.0kb downstream 14326 true Scaffold1211: 46643-60968 Capsella grandiflora
Cagra.1211s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1211: 46643-56642 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373755 5261 Brassicaceae View MSA
123827784 5264 Brassicales-Malvales View MSA
124340082 5266 SBM View MSA
124236916 5268 Malvidae View MSA
124064692 5270 Rosid View MSA
123751373 5271 Pentapetalae View MSA
122789391 5272 Eudicot View MSA
122043545 5273 Angiosperm View MSA
121345255 5274 Embryophyte View MSA
123428601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain