Gene : Cagra.1211s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  10
Name:  ? Cagra.1211s0010 Secondary Identifier:  ? PAC:28915407
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1211s0010 0.5kb upstream 0.5kb upstream 3052 true Scaffold1211: 48663-51714 Capsella grandiflora
Cagra.1211s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1211: 51215-51714 Capsella grandiflora
Cagra.1211s0010 0.5kb downstream 0.5kb downstream 3052 true Scaffold1211: 48163-51214 Capsella grandiflora
Cagra.1211s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1211: 48163-48662 Capsella grandiflora
Cagra.1211s0010 1.0kb upstream 1.0kb upstream 3552 true Scaffold1211: 48663-52214 Capsella grandiflora
Cagra.1211s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1211: 51215-52214 Capsella grandiflora
Cagra.1211s0010 1.0kb downstream 1.0kb downstream 3552 true Scaffold1211: 47663-51214 Capsella grandiflora
Cagra.1211s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1211: 47663-48662 Capsella grandiflora
Cagra.1211s0010 2.0kb upstream 2.0kb upstream 4552 true Scaffold1211: 48663-53214 Capsella grandiflora
Cagra.1211s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1211: 51215-53214 Capsella grandiflora
Cagra.1211s0010 2.0kb downstream 2.0kb downstream 4552 true Scaffold1211: 46663-51214 Capsella grandiflora
Cagra.1211s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1211: 46663-48662 Capsella grandiflora
Cagra.1211s0010 5.0kb upstream 5.0kb upstream 7552 true Scaffold1211: 48663-56214 Capsella grandiflora
Cagra.1211s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1211: 51215-56214 Capsella grandiflora
Cagra.1211s0010 5.0kb downstream 5.0kb downstream 7552 true Scaffold1211: 43663-51214 Capsella grandiflora
Cagra.1211s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1211: 43663-48662 Capsella grandiflora
Cagra.1211s0010 10.0kb upstream 10.0kb upstream 12552 true Scaffold1211: 48663-61214 Capsella grandiflora
Cagra.1211s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1211: 51215-61214 Capsella grandiflora
Cagra.1211s0010 10.0kb downstream 10.0kb downstream 12552 true Scaffold1211: 38663-51214 Capsella grandiflora
Cagra.1211s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1211: 38663-48662 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366754 5261 Brassicaceae View MSA
123830900 5264 Brassicales-Malvales View MSA
124338997 5266 SBM View MSA
124240525 5268 Malvidae View MSA
124062896 5270 Rosid View MSA
123739402 5271 Pentapetalae View MSA
122789155 5272 Eudicot View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain