Gene : Cagra.1211s0011 C. grandiflora v1.1
Defline:  (1 of 6) PF06830 - Root cap (Root_cap) Genomic Order:  11
Name:  ? Cagra.1211s0011 Secondary Identifier:  ? PAC:28915404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1211s0011 0.5kb upstream 0.5kb upstream 2635 true Scaffold1211: 52911-55545 Capsella grandiflora
Cagra.1211s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1211: 52911-53410 Capsella grandiflora
Cagra.1211s0011 0.5kb downstream 0.5kb downstream 2635 true Scaffold1211: 53411-56045 Capsella grandiflora
Cagra.1211s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1211: 55546-56045 Capsella grandiflora
Cagra.1211s0011 1.0kb upstream 1.0kb upstream 3135 true Scaffold1211: 52411-55545 Capsella grandiflora
Cagra.1211s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1211: 52411-53410 Capsella grandiflora
Cagra.1211s0011 1.0kb downstream 1.0kb downstream 3135 true Scaffold1211: 53411-56545 Capsella grandiflora
Cagra.1211s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1211: 55546-56545 Capsella grandiflora
Cagra.1211s0011 2.0kb upstream 2.0kb upstream 4135 true Scaffold1211: 51411-55545 Capsella grandiflora
Cagra.1211s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1211: 51411-53410 Capsella grandiflora
Cagra.1211s0011 2.0kb downstream 2.0kb downstream 4135 true Scaffold1211: 53411-57545 Capsella grandiflora
Cagra.1211s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1211: 55546-57545 Capsella grandiflora
Cagra.1211s0011 5.0kb upstream 5.0kb upstream 7135 true Scaffold1211: 48411-55545 Capsella grandiflora
Cagra.1211s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1211: 48411-53410 Capsella grandiflora
Cagra.1211s0011 5.0kb downstream 5.0kb downstream 7135 true Scaffold1211: 53411-60545 Capsella grandiflora
Cagra.1211s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1211: 55546-60545 Capsella grandiflora
Cagra.1211s0011 10.0kb upstream 10.0kb upstream 12135 true Scaffold1211: 43411-55545 Capsella grandiflora
Cagra.1211s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1211: 43411-53410 Capsella grandiflora
Cagra.1211s0011 10.0kb downstream 10.0kb downstream 12135 true Scaffold1211: 53411-65545 Capsella grandiflora
Cagra.1211s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1211: 55546-65545 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376989 5261 Brassicaceae View MSA
123841489 5264 Brassicales-Malvales View MSA
124322944 5266 SBM View MSA
124250553 5268 Malvidae View MSA
124073376 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain