Gene : Cagra.1211s0016 C. grandiflora v1.1
Defline:  (1 of 8) PF05911 - Filament-like plant protein, long coiled-coil (FPP) Genomic Order:  16
Name:  ? Cagra.1211s0016 Secondary Identifier:  ? PAC:28915394
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1211s0016 0.5kb upstream 0.5kb upstream 2785 true Scaffold1211: 75069-77853 Capsella grandiflora
Cagra.1211s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1211: 77354-77853 Capsella grandiflora
Cagra.1211s0016 0.5kb downstream 0.5kb downstream 2785 true Scaffold1211: 74569-77353 Capsella grandiflora
Cagra.1211s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1211: 74569-75068 Capsella grandiflora
Cagra.1211s0016 1.0kb upstream 1.0kb upstream 3285 true Scaffold1211: 75069-78353 Capsella grandiflora
Cagra.1211s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1211: 77354-78353 Capsella grandiflora
Cagra.1211s0016 1.0kb downstream 1.0kb downstream 3285 true Scaffold1211: 74069-77353 Capsella grandiflora
Cagra.1211s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1211: 74069-75068 Capsella grandiflora
Cagra.1211s0016 2.0kb upstream 2.0kb upstream 4285 true Scaffold1211: 75069-79353 Capsella grandiflora
Cagra.1211s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1211: 77354-79353 Capsella grandiflora
Cagra.1211s0016 2.0kb downstream 2.0kb downstream 4285 true Scaffold1211: 73069-77353 Capsella grandiflora
Cagra.1211s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1211: 73069-75068 Capsella grandiflora
Cagra.1211s0016 5.0kb upstream 5.0kb upstream 7285 true Scaffold1211: 75069-82353 Capsella grandiflora
Cagra.1211s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1211: 77354-82353 Capsella grandiflora
Cagra.1211s0016 5.0kb downstream 5.0kb downstream 7285 true Scaffold1211: 70069-77353 Capsella grandiflora
Cagra.1211s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1211: 70069-75068 Capsella grandiflora
Cagra.1211s0016 10.0kb upstream 10.0kb upstream 12285 true Scaffold1211: 75069-87353 Capsella grandiflora
Cagra.1211s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1211: 77354-87353 Capsella grandiflora
Cagra.1211s0016 10.0kb downstream 10.0kb downstream 12285 true Scaffold1211: 65069-77353 Capsella grandiflora
Cagra.1211s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1211: 65069-75068 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362274 5261 Brassicaceae View MSA
123798338 5264 Brassicales-Malvales View MSA
124295991 5266 SBM View MSA
124148275 5268 Malvidae View MSA
124072617 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain