Gene : Cagra.1216s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23086:SF25 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 7-RELATED Genomic Order:  5
Name:  ? Cagra.1216s0005 Secondary Identifier:  ? PAC:28916755
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1216s0005 0.5kb upstream 0.5kb upstream 5790 true Scaffold1216: 14566-20355 Capsella grandiflora
Cagra.1216s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1216: 19856-20355 Capsella grandiflora
Cagra.1216s0005 0.5kb downstream 0.5kb downstream 5790 true Scaffold1216: 14066-19855 Capsella grandiflora
Cagra.1216s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1216: 14066-14565 Capsella grandiflora
Cagra.1216s0005 1.0kb upstream 1.0kb upstream 6290 true Scaffold1216: 14566-20855 Capsella grandiflora
Cagra.1216s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1216: 19856-20855 Capsella grandiflora
Cagra.1216s0005 1.0kb downstream 1.0kb downstream 6290 true Scaffold1216: 13566-19855 Capsella grandiflora
Cagra.1216s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1216: 13566-14565 Capsella grandiflora
Cagra.1216s0005 2.0kb upstream 2.0kb upstream 7290 true Scaffold1216: 14566-21855 Capsella grandiflora
Cagra.1216s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1216: 19856-21855 Capsella grandiflora
Cagra.1216s0005 2.0kb downstream 2.0kb downstream 7290 true Scaffold1216: 12566-19855 Capsella grandiflora
Cagra.1216s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1216: 12566-14565 Capsella grandiflora
Cagra.1216s0005 5.0kb upstream 5.0kb upstream 10290 true Scaffold1216: 14566-24855 Capsella grandiflora
Cagra.1216s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1216: 19856-24855 Capsella grandiflora
Cagra.1216s0005 5.0kb downstream 5.0kb downstream 10290 true Scaffold1216: 9566-19855 Capsella grandiflora
Cagra.1216s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1216: 9566-14565 Capsella grandiflora
Cagra.1216s0005 10.0kb upstream 10.0kb upstream 15290 true Scaffold1216: 14566-29855 Capsella grandiflora
Cagra.1216s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1216: 19856-29855 Capsella grandiflora
Cagra.1216s0005 10.0kb downstream 10.0kb downstream 15290 true Scaffold1216: 4566-19855 Capsella grandiflora
Cagra.1216s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1216: 4566-14565 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363936 5261 Brassicaceae View MSA
123837700 5264 Brassicales-Malvales View MSA
124340439 5266 SBM View MSA
124241221 5268 Malvidae View MSA
124065349 5270 Rosid View MSA
123742809 5271 Pentapetalae View MSA
122786651 5272 Eudicot View MSA
122046266 5273 Angiosperm View MSA
121310580 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain