Gene : Cagra.1220s0001 C. grandiflora v1.1
Defline:  (1 of 1) KOG1975 - mRNA cap methyltransferase Genomic Order:  1
Name:  ? Cagra.1220s0001 Secondary Identifier:  ? PAC:28910712
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1220s0001 0.5kb upstream 0.5kb upstream 3984 true Scaffold1220: 2302-6285 Capsella grandiflora
Cagra.1220s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1220: 5786-6285 Capsella grandiflora
Cagra.1220s0001 0.5kb downstream 0.5kb downstream 3984 true Scaffold1220: 1802-5785 Capsella grandiflora
Cagra.1220s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1220: 1802-2301 Capsella grandiflora
Cagra.1220s0001 1.0kb upstream 1.0kb upstream 4484 true Scaffold1220: 2302-6785 Capsella grandiflora
Cagra.1220s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1220: 5786-6785 Capsella grandiflora
Cagra.1220s0001 1.0kb downstream 1.0kb downstream 4484 true Scaffold1220: 1302-5785 Capsella grandiflora
Cagra.1220s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1220: 1302-2301 Capsella grandiflora
Cagra.1220s0001 2.0kb upstream 2.0kb upstream 5484 true Scaffold1220: 2302-7785 Capsella grandiflora
Cagra.1220s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1220: 5786-7785 Capsella grandiflora
Cagra.1220s0001 2.0kb downstream 2.0kb downstream 5484 true Scaffold1220: 302-5785 Capsella grandiflora
Cagra.1220s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1220: 302-2301 Capsella grandiflora
Cagra.1220s0001 5.0kb upstream 5.0kb upstream 8484 true Scaffold1220: 2302-10785 Capsella grandiflora
Cagra.1220s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1220: 5786-10785 Capsella grandiflora
Cagra.1220s0001 5.0kb downstream 5.0kb downstream 5785 true Scaffold1220: 1-5785 Capsella grandiflora
Cagra.1220s0001 5.0kb downstream 5.0kb downstream 2301 false Scaffold1220: 1-2301 Capsella grandiflora
Cagra.1220s0001 10.0kb upstream 10.0kb upstream 13484 true Scaffold1220: 2302-15785 Capsella grandiflora
Cagra.1220s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1220: 5786-15785 Capsella grandiflora
Cagra.1220s0001 10.0kb downstream 10.0kb downstream 5785 true Scaffold1220: 1-5785 Capsella grandiflora
Cagra.1220s0001 10.0kb downstream 10.0kb downstream 2301 false Scaffold1220: 1-2301 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362349 5261 Brassicaceae View MSA
123829264 5264 Brassicales-Malvales View MSA
124340033 5266 SBM View MSA
124240161 5268 Malvidae View MSA
124060648 5270 Rosid View MSA
123738979 5271 Pentapetalae View MSA
122793076 5272 Eudicot View MSA
122041775 5273 Angiosperm View MSA
121344632 5274 Embryophyte View MSA
123428419 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain