Gene : Cagra.1225s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31413:SF2 - AFP HOMOLOG 2 Genomic Order:  1
Name:  ? Cagra.1225s0001 Secondary Identifier:  ? PAC:28904130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1225s0001 0.5kb upstream 0.5kb upstream 2103 true Scaffold1225: 1-2103 Capsella grandiflora
Cagra.1225s0001 0.5kb upstream 0.5kb upstream 11 false Scaffold1225: 1-11 Capsella grandiflora
Cagra.1225s0001 0.5kb downstream 0.5kb downstream 2592 true Scaffold1225: 12-2603 Capsella grandiflora
Cagra.1225s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1225: 2104-2603 Capsella grandiflora
Cagra.1225s0001 1.0kb upstream 1.0kb upstream 2103 true Scaffold1225: 1-2103 Capsella grandiflora
Cagra.1225s0001 1.0kb upstream 1.0kb upstream 11 false Scaffold1225: 1-11 Capsella grandiflora
Cagra.1225s0001 1.0kb downstream 1.0kb downstream 3092 true Scaffold1225: 12-3103 Capsella grandiflora
Cagra.1225s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1225: 2104-3103 Capsella grandiflora
Cagra.1225s0001 2.0kb upstream 2.0kb upstream 2103 true Scaffold1225: 1-2103 Capsella grandiflora
Cagra.1225s0001 2.0kb upstream 2.0kb upstream 11 false Scaffold1225: 1-11 Capsella grandiflora
Cagra.1225s0001 2.0kb downstream 2.0kb downstream 4092 true Scaffold1225: 12-4103 Capsella grandiflora
Cagra.1225s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1225: 2104-4103 Capsella grandiflora
Cagra.1225s0001 5.0kb upstream 5.0kb upstream 2103 true Scaffold1225: 1-2103 Capsella grandiflora
Cagra.1225s0001 5.0kb upstream 5.0kb upstream 11 false Scaffold1225: 1-11 Capsella grandiflora
Cagra.1225s0001 5.0kb downstream 5.0kb downstream 7092 true Scaffold1225: 12-7103 Capsella grandiflora
Cagra.1225s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1225: 2104-7103 Capsella grandiflora
Cagra.1225s0001 10.0kb upstream 10.0kb upstream 2103 true Scaffold1225: 1-2103 Capsella grandiflora
Cagra.1225s0001 10.0kb upstream 10.0kb upstream 11 false Scaffold1225: 1-11 Capsella grandiflora
Cagra.1225s0001 10.0kb downstream 10.0kb downstream 12092 true Scaffold1225: 12-12103 Capsella grandiflora
Cagra.1225s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1225: 2104-12103 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361687 5261 Brassicaceae View MSA
123831156 5264 Brassicales-Malvales View MSA
124339681 5266 SBM View MSA
124239021 5268 Malvidae View MSA
124067449 5270 Rosid View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain