Gene : Cagra.1194s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED Genomic Order:  30
Name:  ? Cagra.1194s0030 Secondary Identifier:  ? PAC:28912800
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0030 0.5kb upstream 0.5kb upstream 1613 true Scaffold1194: 96714-98326 Capsella grandiflora
Cagra.1194s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 96714-97213 Capsella grandiflora
Cagra.1194s0030 0.5kb downstream 0.5kb downstream 1613 true Scaffold1194: 97214-98826 Capsella grandiflora
Cagra.1194s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 98327-98826 Capsella grandiflora
Cagra.1194s0030 1.0kb upstream 1.0kb upstream 2113 true Scaffold1194: 96214-98326 Capsella grandiflora
Cagra.1194s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 96214-97213 Capsella grandiflora
Cagra.1194s0030 1.0kb downstream 1.0kb downstream 2113 true Scaffold1194: 97214-99326 Capsella grandiflora
Cagra.1194s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 98327-99326 Capsella grandiflora
Cagra.1194s0030 2.0kb upstream 2.0kb upstream 3113 true Scaffold1194: 95214-98326 Capsella grandiflora
Cagra.1194s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 95214-97213 Capsella grandiflora
Cagra.1194s0030 2.0kb downstream 2.0kb downstream 3113 true Scaffold1194: 97214-100326 Capsella grandiflora
Cagra.1194s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 98327-100326 Capsella grandiflora
Cagra.1194s0030 5.0kb upstream 5.0kb upstream 6113 true Scaffold1194: 92214-98326 Capsella grandiflora
Cagra.1194s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 92214-97213 Capsella grandiflora
Cagra.1194s0030 5.0kb downstream 5.0kb downstream 6113 true Scaffold1194: 97214-103326 Capsella grandiflora
Cagra.1194s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 98327-103326 Capsella grandiflora
Cagra.1194s0030 10.0kb upstream 10.0kb upstream 11113 true Scaffold1194: 87214-98326 Capsella grandiflora
Cagra.1194s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 87214-97213 Capsella grandiflora
Cagra.1194s0030 10.0kb downstream 10.0kb downstream 11113 true Scaffold1194: 97214-108326 Capsella grandiflora
Cagra.1194s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 98327-108326 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369354 5261 Brassicaceae View MSA
123836898 5264 Brassicales-Malvales View MSA
124348522 5266 SBM View MSA
124243481 5268 Malvidae View MSA
124067919 5270 Rosid View MSA
123743661 5271 Pentapetalae View MSA
122790409 5272 Eudicot View MSA
122043508 5273 Angiosperm View MSA
121348014 5274 Embryophyte View MSA
123427200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain