Gene : Cagra.1194s0040 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31155:SF4 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 1, CHLOROPLASTIC-RELATED Genomic Order:  40
Name:  ? Cagra.1194s0040 Secondary Identifier:  ? PAC:28912759
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5147 Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-5366 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0040 0.5kb upstream 0.5kb upstream 3039 true Scaffold1194: 119522-122560 Capsella grandiflora
Cagra.1194s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 122061-122560 Capsella grandiflora
Cagra.1194s0040 0.5kb downstream 0.5kb downstream 3039 true Scaffold1194: 119022-122060 Capsella grandiflora
Cagra.1194s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 119022-119521 Capsella grandiflora
Cagra.1194s0040 1.0kb upstream 1.0kb upstream 3539 true Scaffold1194: 119522-123060 Capsella grandiflora
Cagra.1194s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 122061-123060 Capsella grandiflora
Cagra.1194s0040 1.0kb downstream 1.0kb downstream 3539 true Scaffold1194: 118522-122060 Capsella grandiflora
Cagra.1194s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 118522-119521 Capsella grandiflora
Cagra.1194s0040 2.0kb upstream 2.0kb upstream 4539 true Scaffold1194: 119522-124060 Capsella grandiflora
Cagra.1194s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 122061-124060 Capsella grandiflora
Cagra.1194s0040 2.0kb downstream 2.0kb downstream 4539 true Scaffold1194: 117522-122060 Capsella grandiflora
Cagra.1194s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 117522-119521 Capsella grandiflora
Cagra.1194s0040 5.0kb upstream 5.0kb upstream 7539 true Scaffold1194: 119522-127060 Capsella grandiflora
Cagra.1194s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 122061-127060 Capsella grandiflora
Cagra.1194s0040 5.0kb downstream 5.0kb downstream 7539 true Scaffold1194: 114522-122060 Capsella grandiflora
Cagra.1194s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 114522-119521 Capsella grandiflora
Cagra.1194s0040 10.0kb upstream 10.0kb upstream 12539 true Scaffold1194: 119522-132060 Capsella grandiflora
Cagra.1194s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 122061-132060 Capsella grandiflora
Cagra.1194s0040 10.0kb downstream 10.0kb downstream 12539 true Scaffold1194: 109522-122060 Capsella grandiflora
Cagra.1194s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 109522-119521 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362645 5261 Brassicaceae View MSA
123829168 5264 Brassicales-Malvales View MSA
124350159 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain