Gene : Cagra.1194s0056 C. grandiflora v1.1
Defline:  (1 of 4) PTHR34191:SF2 - STRESS-INDUCED PROTEIN KIN1-RELATED Genomic Order:  56
Name:  ? Cagra.1194s0056 Secondary Identifier:  ? PAC:28912822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0056 0.5kb upstream 0.5kb upstream 1295 true Scaffold1194: 165943-167237 Capsella grandiflora
Cagra.1194s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 166738-167237 Capsella grandiflora
Cagra.1194s0056 0.5kb downstream 0.5kb downstream 1295 true Scaffold1194: 165443-166737 Capsella grandiflora
Cagra.1194s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 165443-165942 Capsella grandiflora
Cagra.1194s0056 1.0kb upstream 1.0kb upstream 1795 true Scaffold1194: 165943-167737 Capsella grandiflora
Cagra.1194s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 166738-167737 Capsella grandiflora
Cagra.1194s0056 1.0kb downstream 1.0kb downstream 1795 true Scaffold1194: 164943-166737 Capsella grandiflora
Cagra.1194s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 164943-165942 Capsella grandiflora
Cagra.1194s0056 2.0kb upstream 2.0kb upstream 2795 true Scaffold1194: 165943-168737 Capsella grandiflora
Cagra.1194s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 166738-168737 Capsella grandiflora
Cagra.1194s0056 2.0kb downstream 2.0kb downstream 2795 true Scaffold1194: 163943-166737 Capsella grandiflora
Cagra.1194s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 163943-165942 Capsella grandiflora
Cagra.1194s0056 5.0kb upstream 5.0kb upstream 5795 true Scaffold1194: 165943-171737 Capsella grandiflora
Cagra.1194s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 166738-171737 Capsella grandiflora
Cagra.1194s0056 5.0kb downstream 5.0kb downstream 5795 true Scaffold1194: 160943-166737 Capsella grandiflora
Cagra.1194s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 160943-165942 Capsella grandiflora
Cagra.1194s0056 10.0kb upstream 10.0kb upstream 10795 true Scaffold1194: 165943-176737 Capsella grandiflora
Cagra.1194s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 166738-176737 Capsella grandiflora
Cagra.1194s0056 10.0kb downstream 10.0kb downstream 10795 true Scaffold1194: 155943-166737 Capsella grandiflora
Cagra.1194s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 155943-165942 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361207 5261 Brassicaceae View MSA
123838955 5264 Brassicales-Malvales View MSA
124337448 5266 SBM View MSA
124248730 5268 Malvidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain