Gene : Cagra.1195s0014 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Genomic Order:  14
Name:  ? Cagra.1195s0014 Secondary Identifier:  ? PAC:28915275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1195s0014 0.5kb upstream 0.5kb upstream 4015 true Scaffold1195: 59095-63109 Capsella grandiflora
Cagra.1195s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold1195: 59095-59594 Capsella grandiflora
Cagra.1195s0014 0.5kb downstream 0.5kb downstream 4015 true Scaffold1195: 59595-63609 Capsella grandiflora
Cagra.1195s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold1195: 63110-63609 Capsella grandiflora
Cagra.1195s0014 1.0kb upstream 1.0kb upstream 4515 true Scaffold1195: 58595-63109 Capsella grandiflora
Cagra.1195s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold1195: 58595-59594 Capsella grandiflora
Cagra.1195s0014 1.0kb downstream 1.0kb downstream 4515 true Scaffold1195: 59595-64109 Capsella grandiflora
Cagra.1195s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold1195: 63110-64109 Capsella grandiflora
Cagra.1195s0014 2.0kb upstream 2.0kb upstream 5515 true Scaffold1195: 57595-63109 Capsella grandiflora
Cagra.1195s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold1195: 57595-59594 Capsella grandiflora
Cagra.1195s0014 2.0kb downstream 2.0kb downstream 5515 true Scaffold1195: 59595-65109 Capsella grandiflora
Cagra.1195s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold1195: 63110-65109 Capsella grandiflora
Cagra.1195s0014 5.0kb upstream 5.0kb upstream 8515 true Scaffold1195: 54595-63109 Capsella grandiflora
Cagra.1195s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold1195: 54595-59594 Capsella grandiflora
Cagra.1195s0014 5.0kb downstream 5.0kb downstream 8515 true Scaffold1195: 59595-68109 Capsella grandiflora
Cagra.1195s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold1195: 63110-68109 Capsella grandiflora
Cagra.1195s0014 10.0kb upstream 10.0kb upstream 13515 true Scaffold1195: 49595-63109 Capsella grandiflora
Cagra.1195s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold1195: 49595-59594 Capsella grandiflora
Cagra.1195s0014 10.0kb downstream 10.0kb downstream 13515 true Scaffold1195: 59595-73109 Capsella grandiflora
Cagra.1195s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold1195: 63110-73109 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360894 5261 Brassicaceae View MSA
123827658 5264 Brassicales-Malvales View MSA
124346181 5266 SBM View MSA
124253322 5268 Malvidae View MSA
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain