Gene : Cagra.1195s0019 C. grandiflora v1.1
Defline:  (1 of 3) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  19
Name:  ? Cagra.1195s0019 Secondary Identifier:  ? PAC:28915297
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRNA-CHARGING-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1195s0019 0.5kb upstream 0.5kb upstream 3148 true Scaffold1195: 70806-73953 Capsella grandiflora
Cagra.1195s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1195: 73454-73953 Capsella grandiflora
Cagra.1195s0019 0.5kb downstream 0.5kb downstream 3148 true Scaffold1195: 70306-73453 Capsella grandiflora
Cagra.1195s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1195: 70306-70805 Capsella grandiflora
Cagra.1195s0019 1.0kb upstream 1.0kb upstream 3648 true Scaffold1195: 70806-74453 Capsella grandiflora
Cagra.1195s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1195: 73454-74453 Capsella grandiflora
Cagra.1195s0019 1.0kb downstream 1.0kb downstream 3648 true Scaffold1195: 69806-73453 Capsella grandiflora
Cagra.1195s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1195: 69806-70805 Capsella grandiflora
Cagra.1195s0019 2.0kb upstream 2.0kb upstream 4648 true Scaffold1195: 70806-75453 Capsella grandiflora
Cagra.1195s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1195: 73454-75453 Capsella grandiflora
Cagra.1195s0019 2.0kb downstream 2.0kb downstream 4648 true Scaffold1195: 68806-73453 Capsella grandiflora
Cagra.1195s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1195: 68806-70805 Capsella grandiflora
Cagra.1195s0019 5.0kb upstream 5.0kb upstream 7648 true Scaffold1195: 70806-78453 Capsella grandiflora
Cagra.1195s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1195: 73454-78453 Capsella grandiflora
Cagra.1195s0019 5.0kb downstream 5.0kb downstream 7648 true Scaffold1195: 65806-73453 Capsella grandiflora
Cagra.1195s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1195: 65806-70805 Capsella grandiflora
Cagra.1195s0019 10.0kb upstream 10.0kb upstream 12648 true Scaffold1195: 70806-83453 Capsella grandiflora
Cagra.1195s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1195: 73454-83453 Capsella grandiflora
Cagra.1195s0019 10.0kb downstream 10.0kb downstream 12648 true Scaffold1195: 60806-73453 Capsella grandiflora
Cagra.1195s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1195: 60806-70805 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
122377924 5261 Brassicaceae View MSA
123834214 5264 Brassicales-Malvales View MSA
124340654 5266 SBM View MSA
124239628 5268 Malvidae View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain