Gene : Cagra.1195s0023 C. grandiflora v1.1
Defline:  (1 of 14) PF03110 - SBP domain (SBP) Genomic Order:  23
Name:  ? Cagra.1195s0023 Secondary Identifier:  ? PAC:28915282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1195s0023 0.5kb upstream 0.5kb upstream 1372 true Scaffold1195: 82341-83712 Capsella grandiflora
Cagra.1195s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold1195: 83213-83712 Capsella grandiflora
Cagra.1195s0023 0.5kb downstream 0.5kb downstream 1372 true Scaffold1195: 81841-83212 Capsella grandiflora
Cagra.1195s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold1195: 81841-82340 Capsella grandiflora
Cagra.1195s0023 1.0kb upstream 1.0kb upstream 1872 true Scaffold1195: 82341-84212 Capsella grandiflora
Cagra.1195s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold1195: 83213-84212 Capsella grandiflora
Cagra.1195s0023 1.0kb downstream 1.0kb downstream 1872 true Scaffold1195: 81341-83212 Capsella grandiflora
Cagra.1195s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold1195: 81341-82340 Capsella grandiflora
Cagra.1195s0023 2.0kb upstream 2.0kb upstream 2872 true Scaffold1195: 82341-85212 Capsella grandiflora
Cagra.1195s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold1195: 83213-85212 Capsella grandiflora
Cagra.1195s0023 2.0kb downstream 2.0kb downstream 2872 true Scaffold1195: 80341-83212 Capsella grandiflora
Cagra.1195s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold1195: 80341-82340 Capsella grandiflora
Cagra.1195s0023 5.0kb upstream 5.0kb upstream 5872 true Scaffold1195: 82341-88212 Capsella grandiflora
Cagra.1195s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold1195: 83213-88212 Capsella grandiflora
Cagra.1195s0023 5.0kb downstream 5.0kb downstream 5872 true Scaffold1195: 77341-83212 Capsella grandiflora
Cagra.1195s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold1195: 77341-82340 Capsella grandiflora
Cagra.1195s0023 10.0kb upstream 10.0kb upstream 8348 true Scaffold1195: 82341-90688 Capsella grandiflora
Cagra.1195s0023 10.0kb upstream 10.0kb upstream 7476 false Scaffold1195: 83213-90688 Capsella grandiflora
Cagra.1195s0023 10.0kb downstream 10.0kb downstream 10872 true Scaffold1195: 72341-83212 Capsella grandiflora
Cagra.1195s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold1195: 72341-82340 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376263 5261 Brassicaceae View MSA
123827867 5264 Brassicales-Malvales View MSA
124344103 5266 SBM View MSA
124243691 5268 Malvidae View MSA
124068768 5270 Rosid View MSA
123745338 5271 Pentapetalae View MSA
122797834 5272 Eudicot View MSA
122050798 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain