Gene : Cagra.1201s0002 C. grandiflora v1.1

Defline:  (1 of 1) KOG0870 - DNA polymerase epsilon, subunit D Genomic Order:  2
Name:  ? Cagra.1201s0002 Secondary Identifier:  ? PAC:28910418

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1201s0002 0.5kb upstream 0.5kb upstream 1799 true Scaffold1201: 4725-6523 Capsella grandiflora
Cagra.1201s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1201: 4725-5224 Capsella grandiflora
Cagra.1201s0002 0.5kb downstream 0.5kb downstream 1799 true Scaffold1201: 5225-7023 Capsella grandiflora
Cagra.1201s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1201: 6524-7023 Capsella grandiflora
Cagra.1201s0002 1.0kb upstream 1.0kb upstream 2299 true Scaffold1201: 4225-6523 Capsella grandiflora
Cagra.1201s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1201: 4225-5224 Capsella grandiflora
Cagra.1201s0002 1.0kb downstream 1.0kb downstream 2299 true Scaffold1201: 5225-7523 Capsella grandiflora
Cagra.1201s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1201: 6524-7523 Capsella grandiflora
Cagra.1201s0002 2.0kb upstream 2.0kb upstream 3299 true Scaffold1201: 3225-6523 Capsella grandiflora
Cagra.1201s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1201: 3225-5224 Capsella grandiflora
Cagra.1201s0002 2.0kb downstream 2.0kb downstream 3299 true Scaffold1201: 5225-8523 Capsella grandiflora
Cagra.1201s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1201: 6524-8523 Capsella grandiflora
Cagra.1201s0002 5.0kb upstream 5.0kb upstream 6299 true Scaffold1201: 225-6523 Capsella grandiflora
Cagra.1201s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1201: 225-5224 Capsella grandiflora
Cagra.1201s0002 5.0kb downstream 5.0kb downstream 6299 true Scaffold1201: 5225-11523 Capsella grandiflora
Cagra.1201s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1201: 6524-11523 Capsella grandiflora
Cagra.1201s0002 10.0kb upstream 10.0kb upstream 6523 true Scaffold1201: 1-6523 Capsella grandiflora
Cagra.1201s0002 10.0kb upstream 10.0kb upstream 5224 false Scaffold1201: 1-5224 Capsella grandiflora
Cagra.1201s0002 10.0kb downstream 10.0kb downstream 11299 true Scaffold1201: 5225-16523 Capsella grandiflora
Cagra.1201s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1201: 6524-16523 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373077 5261 Brassicaceae View MSA
123839331 5264 Brassicales-Malvales View MSA
124347212 5266 SBM View MSA
124246011 5268 Malvidae View MSA
124065449 5270 Rosid View MSA
123742361 5271 Pentapetalae View MSA
122794947 5272 Eudicot View MSA
122048157 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121348277 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain