Gene : Cagra.1202s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11134:SF1 - RUBY, ISOFORM B Genomic Order:  1
Name:  ? Cagra.1202s0001 Secondary Identifier:  ? PAC:28910229
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1202s0001 0.5kb upstream 0.5kb upstream 5631 true Scaffold1202: 7-5637 Capsella grandiflora
Cagra.1202s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1202: 7-506 Capsella grandiflora
Cagra.1202s0001 0.5kb downstream 0.5kb downstream 5631 true Scaffold1202: 507-6137 Capsella grandiflora
Cagra.1202s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1202: 5638-6137 Capsella grandiflora
Cagra.1202s0001 1.0kb upstream 1.0kb upstream 5637 true Scaffold1202: 1-5637 Capsella grandiflora
Cagra.1202s0001 1.0kb upstream 1.0kb upstream 506 false Scaffold1202: 1-506 Capsella grandiflora
Cagra.1202s0001 1.0kb downstream 1.0kb downstream 6131 true Scaffold1202: 507-6637 Capsella grandiflora
Cagra.1202s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1202: 5638-6637 Capsella grandiflora
Cagra.1202s0001 2.0kb upstream 2.0kb upstream 5637 true Scaffold1202: 1-5637 Capsella grandiflora
Cagra.1202s0001 2.0kb upstream 2.0kb upstream 506 false Scaffold1202: 1-506 Capsella grandiflora
Cagra.1202s0001 2.0kb downstream 2.0kb downstream 7131 true Scaffold1202: 507-7637 Capsella grandiflora
Cagra.1202s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1202: 5638-7637 Capsella grandiflora
Cagra.1202s0001 5.0kb upstream 5.0kb upstream 5637 true Scaffold1202: 1-5637 Capsella grandiflora
Cagra.1202s0001 5.0kb upstream 5.0kb upstream 506 false Scaffold1202: 1-506 Capsella grandiflora
Cagra.1202s0001 5.0kb downstream 5.0kb downstream 10131 true Scaffold1202: 507-10637 Capsella grandiflora
Cagra.1202s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1202: 5638-10637 Capsella grandiflora
Cagra.1202s0001 10.0kb upstream 10.0kb upstream 5637 true Scaffold1202: 1-5637 Capsella grandiflora
Cagra.1202s0001 10.0kb upstream 10.0kb upstream 506 false Scaffold1202: 1-506 Capsella grandiflora
Cagra.1202s0001 10.0kb downstream 10.0kb downstream 15131 true Scaffold1202: 507-15637 Capsella grandiflora
Cagra.1202s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1202: 5638-15637 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332403 5261 Brassicaceae Singleton cluster - no MSA
123837625 5264 Brassicales-Malvales View MSA
124337138 5266 SBM View MSA
124242688 5268 Malvidae View MSA
124063953 5270 Rosid View MSA
123736647 5271 Pentapetalae View MSA
122788279 5272 Eudicot View MSA
122042560 5273 Angiosperm View MSA
121346177 5274 Embryophyte View MSA
123425286 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain