Gene : Cagra.1508s0036 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10638:SF36 - AMINE OXIDASE-RELATED Genomic Order:  36
Name:  ? Cagra.1508s0036 Secondary Identifier:  ? PAC:28905795
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5751 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0036 0.5kb upstream 0.5kb upstream 3769 true Scaffold1508: 155911-159679 Capsella grandiflora
Cagra.1508s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 159180-159679 Capsella grandiflora
Cagra.1508s0036 0.5kb downstream 0.5kb downstream 3769 true Scaffold1508: 155411-159179 Capsella grandiflora
Cagra.1508s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 155411-155910 Capsella grandiflora
Cagra.1508s0036 1.0kb upstream 1.0kb upstream 4269 true Scaffold1508: 155911-160179 Capsella grandiflora
Cagra.1508s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 159180-160179 Capsella grandiflora
Cagra.1508s0036 1.0kb downstream 1.0kb downstream 4269 true Scaffold1508: 154911-159179 Capsella grandiflora
Cagra.1508s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 154911-155910 Capsella grandiflora
Cagra.1508s0036 2.0kb upstream 2.0kb upstream 5269 true Scaffold1508: 155911-161179 Capsella grandiflora
Cagra.1508s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 159180-161179 Capsella grandiflora
Cagra.1508s0036 2.0kb downstream 2.0kb downstream 5269 true Scaffold1508: 153911-159179 Capsella grandiflora
Cagra.1508s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 153911-155910 Capsella grandiflora
Cagra.1508s0036 5.0kb upstream 5.0kb upstream 8269 true Scaffold1508: 155911-164179 Capsella grandiflora
Cagra.1508s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 159180-164179 Capsella grandiflora
Cagra.1508s0036 5.0kb downstream 5.0kb downstream 8269 true Scaffold1508: 150911-159179 Capsella grandiflora
Cagra.1508s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 150911-155910 Capsella grandiflora
Cagra.1508s0036 10.0kb upstream 10.0kb upstream 13269 true Scaffold1508: 155911-169179 Capsella grandiflora
Cagra.1508s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 159180-169179 Capsella grandiflora
Cagra.1508s0036 10.0kb downstream 10.0kb downstream 13269 true Scaffold1508: 145911-159179 Capsella grandiflora
Cagra.1508s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 145911-155910 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378632 5261 Brassicaceae View MSA
123837701 5264 Brassicales-Malvales View MSA
124346969 5266 SBM View MSA
124247192 5268 Malvidae View MSA
124072120 5270 Rosid View MSA
123747865 5271 Pentapetalae View MSA
122787372 5272 Eudicot View MSA
122049910 5273 Angiosperm View MSA
123428923 5275 Viridiplantae View MSA
121349913 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain