Gene : Cagra.1508s0062 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33492:SF2 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  62
Name:  ? Cagra.1508s0062 Secondary Identifier:  ? PAC:28905690
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0062 0.5kb upstream 0.5kb upstream 2137 true Scaffold1508: 269326-271462 Capsella grandiflora
Cagra.1508s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 269326-269825 Capsella grandiflora
Cagra.1508s0062 0.5kb downstream 0.5kb downstream 2137 true Scaffold1508: 269826-271962 Capsella grandiflora
Cagra.1508s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 271463-271962 Capsella grandiflora
Cagra.1508s0062 1.0kb upstream 1.0kb upstream 2637 true Scaffold1508: 268826-271462 Capsella grandiflora
Cagra.1508s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 268826-269825 Capsella grandiflora
Cagra.1508s0062 1.0kb downstream 1.0kb downstream 2637 true Scaffold1508: 269826-272462 Capsella grandiflora
Cagra.1508s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 271463-272462 Capsella grandiflora
Cagra.1508s0062 2.0kb upstream 2.0kb upstream 3637 true Scaffold1508: 267826-271462 Capsella grandiflora
Cagra.1508s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 267826-269825 Capsella grandiflora
Cagra.1508s0062 2.0kb downstream 2.0kb downstream 3637 true Scaffold1508: 269826-273462 Capsella grandiflora
Cagra.1508s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 271463-273462 Capsella grandiflora
Cagra.1508s0062 5.0kb upstream 5.0kb upstream 6637 true Scaffold1508: 264826-271462 Capsella grandiflora
Cagra.1508s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 264826-269825 Capsella grandiflora
Cagra.1508s0062 5.0kb downstream 5.0kb downstream 6637 true Scaffold1508: 269826-276462 Capsella grandiflora
Cagra.1508s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 271463-276462 Capsella grandiflora
Cagra.1508s0062 10.0kb upstream 10.0kb upstream 11637 true Scaffold1508: 259826-271462 Capsella grandiflora
Cagra.1508s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 259826-269825 Capsella grandiflora
Cagra.1508s0062 10.0kb downstream 10.0kb downstream 11637 true Scaffold1508: 269826-281462 Capsella grandiflora
Cagra.1508s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 271463-281462 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363231 5261 Brassicaceae View MSA
123836111 5264 Brassicales-Malvales View MSA
124351019 5266 SBM View MSA
124236840 5268 Malvidae View MSA
124072606 5270 Rosid View MSA
123744307 5271 Pentapetalae View MSA
122795013 5272 Eudicot View MSA
122048158 5273 Angiosperm View MSA
121351140 5274 Embryophyte View MSA
123382022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain