Gene : Cagra.1508s0061 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31301:SF15 - LOB DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  61
Name:  ? Cagra.1508s0061 Secondary Identifier:  ? PAC:28905861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0061 0.5kb upstream 0.5kb upstream 1914 true Scaffold1508: 253571-255484 Capsella grandiflora
Cagra.1508s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 254985-255484 Capsella grandiflora
Cagra.1508s0061 0.5kb downstream 0.5kb downstream 1914 true Scaffold1508: 253071-254984 Capsella grandiflora
Cagra.1508s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 253071-253570 Capsella grandiflora
Cagra.1508s0061 1.0kb upstream 1.0kb upstream 2414 true Scaffold1508: 253571-255984 Capsella grandiflora
Cagra.1508s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 254985-255984 Capsella grandiflora
Cagra.1508s0061 1.0kb downstream 1.0kb downstream 2414 true Scaffold1508: 252571-254984 Capsella grandiflora
Cagra.1508s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 252571-253570 Capsella grandiflora
Cagra.1508s0061 2.0kb upstream 2.0kb upstream 3414 true Scaffold1508: 253571-256984 Capsella grandiflora
Cagra.1508s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 254985-256984 Capsella grandiflora
Cagra.1508s0061 2.0kb downstream 2.0kb downstream 3414 true Scaffold1508: 251571-254984 Capsella grandiflora
Cagra.1508s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 251571-253570 Capsella grandiflora
Cagra.1508s0061 5.0kb upstream 5.0kb upstream 6414 true Scaffold1508: 253571-259984 Capsella grandiflora
Cagra.1508s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 254985-259984 Capsella grandiflora
Cagra.1508s0061 5.0kb downstream 5.0kb downstream 6414 true Scaffold1508: 248571-254984 Capsella grandiflora
Cagra.1508s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 248571-253570 Capsella grandiflora
Cagra.1508s0061 10.0kb upstream 10.0kb upstream 11414 true Scaffold1508: 253571-264984 Capsella grandiflora
Cagra.1508s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 254985-264984 Capsella grandiflora
Cagra.1508s0061 10.0kb downstream 10.0kb downstream 11414 true Scaffold1508: 243571-254984 Capsella grandiflora
Cagra.1508s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 243571-253570 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365714 5261 Brassicaceae View MSA
123831230 5264 Brassicales-Malvales View MSA
124341725 5266 SBM View MSA
124245573 5268 Malvidae View MSA
124072820 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain