Gene : Cagra.1508s0072 C. grandiflora v1.1
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Aspartate kinase / Aspartokinase Genomic Order:  72
Name:  ? Cagra.1508s0072 Secondary Identifier:  ? PAC:28905783
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora HOMOSERSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3001 Capsella grandiflora pathologic  
Cgrandiflora PWY-5097 Capsella grandiflora pathologic  
Cgrandiflora PWY-724 Capsella grandiflora pathologic  
Cgrandiflora THRESYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0072 0.5kb upstream 0.5kb upstream 5223 true Scaffold1508: 306630-311852 Capsella grandiflora
Cagra.1508s0072 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 306630-307129 Capsella grandiflora
Cagra.1508s0072 0.5kb downstream 0.5kb downstream 5223 true Scaffold1508: 307130-312352 Capsella grandiflora
Cagra.1508s0072 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 311853-312352 Capsella grandiflora
Cagra.1508s0072 1.0kb upstream 1.0kb upstream 5723 true Scaffold1508: 306130-311852 Capsella grandiflora
Cagra.1508s0072 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 306130-307129 Capsella grandiflora
Cagra.1508s0072 1.0kb downstream 1.0kb downstream 5723 true Scaffold1508: 307130-312852 Capsella grandiflora
Cagra.1508s0072 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 311853-312852 Capsella grandiflora
Cagra.1508s0072 2.0kb upstream 2.0kb upstream 6723 true Scaffold1508: 305130-311852 Capsella grandiflora
Cagra.1508s0072 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 305130-307129 Capsella grandiflora
Cagra.1508s0072 2.0kb downstream 2.0kb downstream 6723 true Scaffold1508: 307130-313852 Capsella grandiflora
Cagra.1508s0072 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 311853-313852 Capsella grandiflora
Cagra.1508s0072 5.0kb upstream 5.0kb upstream 9723 true Scaffold1508: 302130-311852 Capsella grandiflora
Cagra.1508s0072 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 302130-307129 Capsella grandiflora
Cagra.1508s0072 5.0kb downstream 5.0kb downstream 9723 true Scaffold1508: 307130-316852 Capsella grandiflora
Cagra.1508s0072 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 311853-316852 Capsella grandiflora
Cagra.1508s0072 10.0kb upstream 10.0kb upstream 14723 true Scaffold1508: 297130-311852 Capsella grandiflora
Cagra.1508s0072 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 297130-307129 Capsella grandiflora
Cagra.1508s0072 10.0kb downstream 10.0kb downstream 14723 true Scaffold1508: 307130-321852 Capsella grandiflora
Cagra.1508s0072 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 311853-321852 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363232 5261 Brassicaceae View MSA
123837065 5264 Brassicales-Malvales View MSA
124346025 5266 SBM View MSA
124243959 5268 Malvidae View MSA
124067286 5270 Rosid View MSA
123739285 5271 Pentapetalae View MSA
122788186 5272 Eudicot View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain