Gene : Cagra.1508s0103 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  103
Name:  ? Cagra.1508s0103 Secondary Identifier:  ? PAC:28905834
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5963 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0103 0.5kb upstream 0.5kb upstream 2673 true Scaffold1508: 423324-425996 Capsella grandiflora
Cagra.1508s0103 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 425497-425996 Capsella grandiflora
Cagra.1508s0103 0.5kb downstream 0.5kb downstream 2673 true Scaffold1508: 422824-425496 Capsella grandiflora
Cagra.1508s0103 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 422824-423323 Capsella grandiflora
Cagra.1508s0103 1.0kb upstream 1.0kb upstream 3173 true Scaffold1508: 423324-426496 Capsella grandiflora
Cagra.1508s0103 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 425497-426496 Capsella grandiflora
Cagra.1508s0103 1.0kb downstream 1.0kb downstream 3173 true Scaffold1508: 422324-425496 Capsella grandiflora
Cagra.1508s0103 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 422324-423323 Capsella grandiflora
Cagra.1508s0103 2.0kb upstream 2.0kb upstream 4173 true Scaffold1508: 423324-427496 Capsella grandiflora
Cagra.1508s0103 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 425497-427496 Capsella grandiflora
Cagra.1508s0103 2.0kb downstream 2.0kb downstream 4173 true Scaffold1508: 421324-425496 Capsella grandiflora
Cagra.1508s0103 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 421324-423323 Capsella grandiflora
Cagra.1508s0103 5.0kb upstream 5.0kb upstream 7173 true Scaffold1508: 423324-430496 Capsella grandiflora
Cagra.1508s0103 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 425497-430496 Capsella grandiflora
Cagra.1508s0103 5.0kb downstream 5.0kb downstream 7173 true Scaffold1508: 418324-425496 Capsella grandiflora
Cagra.1508s0103 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 418324-423323 Capsella grandiflora
Cagra.1508s0103 10.0kb upstream 10.0kb upstream 12173 true Scaffold1508: 423324-435496 Capsella grandiflora
Cagra.1508s0103 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 425497-435496 Capsella grandiflora
Cagra.1508s0103 10.0kb downstream 10.0kb downstream 12173 true Scaffold1508: 413324-425496 Capsella grandiflora
Cagra.1508s0103 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 413324-423323 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365155 5261 Brassicaceae View MSA
123832296 5264 Brassicales-Malvales View MSA
124350481 5266 SBM View MSA
124237148 5268 Malvidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain