Gene : Cagra.1508s0133 C. grandiflora v1.1
Defline:  (1 of 1) KOG2373 - Predicted mitochondrial DNA helicase twinkle Genomic Order:  133
Name:  ? Cagra.1508s0133 Secondary Identifier:  ? PAC:28905695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0133 0.5kb upstream 0.5kb upstream 5306 true Scaffold1508: 549489-554794 Capsella grandiflora
Cagra.1508s0133 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 554295-554794 Capsella grandiflora
Cagra.1508s0133 0.5kb downstream 0.5kb downstream 5306 true Scaffold1508: 548989-554294 Capsella grandiflora
Cagra.1508s0133 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 548989-549488 Capsella grandiflora
Cagra.1508s0133 1.0kb upstream 1.0kb upstream 5806 true Scaffold1508: 549489-555294 Capsella grandiflora
Cagra.1508s0133 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 554295-555294 Capsella grandiflora
Cagra.1508s0133 1.0kb downstream 1.0kb downstream 5806 true Scaffold1508: 548489-554294 Capsella grandiflora
Cagra.1508s0133 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 548489-549488 Capsella grandiflora
Cagra.1508s0133 2.0kb upstream 2.0kb upstream 6806 true Scaffold1508: 549489-556294 Capsella grandiflora
Cagra.1508s0133 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 554295-556294 Capsella grandiflora
Cagra.1508s0133 2.0kb downstream 2.0kb downstream 6806 true Scaffold1508: 547489-554294 Capsella grandiflora
Cagra.1508s0133 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 547489-549488 Capsella grandiflora
Cagra.1508s0133 5.0kb upstream 5.0kb upstream 9806 true Scaffold1508: 549489-559294 Capsella grandiflora
Cagra.1508s0133 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 554295-559294 Capsella grandiflora
Cagra.1508s0133 5.0kb downstream 5.0kb downstream 9806 true Scaffold1508: 544489-554294 Capsella grandiflora
Cagra.1508s0133 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 544489-549488 Capsella grandiflora
Cagra.1508s0133 10.0kb upstream 10.0kb upstream 14806 true Scaffold1508: 549489-564294 Capsella grandiflora
Cagra.1508s0133 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 554295-564294 Capsella grandiflora
Cagra.1508s0133 10.0kb downstream 10.0kb downstream 14806 true Scaffold1508: 539489-554294 Capsella grandiflora
Cagra.1508s0133 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 539489-549488 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374950 5261 Brassicaceae View MSA
123829625 5264 Brassicales-Malvales View MSA
124339667 5266 SBM View MSA
124241424 5268 Malvidae View MSA
124064761 5270 Rosid View MSA
123739173 5271 Pentapetalae View MSA
122792850 5272 Eudicot View MSA
122043908 5273 Angiosperm View MSA
121344607 5274 Embryophyte View MSA
123424427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain