Gene : Cagra.1508s0139 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24356:SF183 - AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN Genomic Order:  139
Name:  ? Cagra.1508s0139 Secondary Identifier:  ? PAC:28905705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0139 0.5kb upstream 0.5kb upstream 5402 true Scaffold1508: 579739-585140 Capsella grandiflora
Cagra.1508s0139 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 584641-585140 Capsella grandiflora
Cagra.1508s0139 0.5kb downstream 0.5kb downstream 5402 true Scaffold1508: 579239-584640 Capsella grandiflora
Cagra.1508s0139 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 579239-579738 Capsella grandiflora
Cagra.1508s0139 1.0kb upstream 1.0kb upstream 5902 true Scaffold1508: 579739-585640 Capsella grandiflora
Cagra.1508s0139 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 584641-585640 Capsella grandiflora
Cagra.1508s0139 1.0kb downstream 1.0kb downstream 5902 true Scaffold1508: 578739-584640 Capsella grandiflora
Cagra.1508s0139 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 578739-579738 Capsella grandiflora
Cagra.1508s0139 2.0kb upstream 2.0kb upstream 6902 true Scaffold1508: 579739-586640 Capsella grandiflora
Cagra.1508s0139 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 584641-586640 Capsella grandiflora
Cagra.1508s0139 2.0kb downstream 2.0kb downstream 6902 true Scaffold1508: 577739-584640 Capsella grandiflora
Cagra.1508s0139 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 577739-579738 Capsella grandiflora
Cagra.1508s0139 5.0kb upstream 5.0kb upstream 9902 true Scaffold1508: 579739-589640 Capsella grandiflora
Cagra.1508s0139 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 584641-589640 Capsella grandiflora
Cagra.1508s0139 5.0kb downstream 5.0kb downstream 9902 true Scaffold1508: 574739-584640 Capsella grandiflora
Cagra.1508s0139 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 574739-579738 Capsella grandiflora
Cagra.1508s0139 10.0kb upstream 10.0kb upstream 14902 true Scaffold1508: 579739-594640 Capsella grandiflora
Cagra.1508s0139 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 584641-594640 Capsella grandiflora
Cagra.1508s0139 10.0kb downstream 10.0kb downstream 14902 true Scaffold1508: 569739-584640 Capsella grandiflora
Cagra.1508s0139 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 569739-579738 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510183 5273 Angiosperm View MSA
122360252 5261 Brassicaceae View MSA
123797921 5264 Brassicales-Malvales View MSA
124295620 5266 SBM View MSA
124148009 5268 Malvidae View MSA
123874097 5270 Rosid View MSA
123458120 5271 Pentapetalae View MSA
122493531 5272 Eudicot View MSA
120783294 5274 Embryophyte View MSA
123428649 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain