Gene : Cagra.1504s0048 C. grandiflora v1.1
Defline:  (1 of 2) 3.2.1.96 - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase / Endo-beta-N-acetylglucosaminidase Genomic Order:  48
Name:  ? Cagra.1504s0048 Secondary Identifier:  ? PAC:28910259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1504s0048 0.5kb upstream 0.5kb upstream 3997 true Scaffold1504: 155783-159779 Capsella grandiflora
Cagra.1504s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold1504: 155783-156282 Capsella grandiflora
Cagra.1504s0048 0.5kb downstream 0.5kb downstream 3997 true Scaffold1504: 156283-160279 Capsella grandiflora
Cagra.1504s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold1504: 159780-160279 Capsella grandiflora
Cagra.1504s0048 1.0kb upstream 1.0kb upstream 4497 true Scaffold1504: 155283-159779 Capsella grandiflora
Cagra.1504s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold1504: 155283-156282 Capsella grandiflora
Cagra.1504s0048 1.0kb downstream 1.0kb downstream 4497 true Scaffold1504: 156283-160779 Capsella grandiflora
Cagra.1504s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold1504: 159780-160779 Capsella grandiflora
Cagra.1504s0048 2.0kb upstream 2.0kb upstream 5497 true Scaffold1504: 154283-159779 Capsella grandiflora
Cagra.1504s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold1504: 154283-156282 Capsella grandiflora
Cagra.1504s0048 2.0kb downstream 2.0kb downstream 5497 true Scaffold1504: 156283-161779 Capsella grandiflora
Cagra.1504s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold1504: 159780-161779 Capsella grandiflora
Cagra.1504s0048 5.0kb upstream 5.0kb upstream 8497 true Scaffold1504: 151283-159779 Capsella grandiflora
Cagra.1504s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold1504: 151283-156282 Capsella grandiflora
Cagra.1504s0048 5.0kb downstream 5.0kb downstream 8497 true Scaffold1504: 156283-164779 Capsella grandiflora
Cagra.1504s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold1504: 159780-164779 Capsella grandiflora
Cagra.1504s0048 10.0kb upstream 10.0kb upstream 13497 true Scaffold1504: 146283-159779 Capsella grandiflora
Cagra.1504s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold1504: 146283-156282 Capsella grandiflora
Cagra.1504s0048 10.0kb downstream 10.0kb downstream 13497 true Scaffold1504: 156283-169779 Capsella grandiflora
Cagra.1504s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold1504: 159780-169779 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367690 5261 Brassicaceae View MSA
123838011 5264 Brassicales-Malvales View MSA
124340197 5266 SBM View MSA
124240036 5268 Malvidae View MSA
124065464 5270 Rosid View MSA
123746256 5271 Pentapetalae View MSA
122791374 5272 Eudicot View MSA
122042882 5273 Angiosperm View MSA
121344799 5274 Embryophyte View MSA
123426300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain