Gene : Cagra.1504s0059 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Genomic Order:  59
Name:  ? Cagra.1504s0059 Secondary Identifier:  ? PAC:28910297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1504s0059 0.5kb upstream 0.5kb upstream 2789 true Scaffold1504: 203057-205845 Capsella grandiflora
Cagra.1504s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold1504: 203057-203556 Capsella grandiflora
Cagra.1504s0059 0.5kb downstream 0.5kb downstream 2789 true Scaffold1504: 203557-206345 Capsella grandiflora
Cagra.1504s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold1504: 205846-206345 Capsella grandiflora
Cagra.1504s0059 1.0kb upstream 1.0kb upstream 3289 true Scaffold1504: 202557-205845 Capsella grandiflora
Cagra.1504s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold1504: 202557-203556 Capsella grandiflora
Cagra.1504s0059 1.0kb downstream 1.0kb downstream 3289 true Scaffold1504: 203557-206845 Capsella grandiflora
Cagra.1504s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold1504: 205846-206845 Capsella grandiflora
Cagra.1504s0059 2.0kb upstream 2.0kb upstream 4289 true Scaffold1504: 201557-205845 Capsella grandiflora
Cagra.1504s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold1504: 201557-203556 Capsella grandiflora
Cagra.1504s0059 2.0kb downstream 2.0kb downstream 4289 true Scaffold1504: 203557-207845 Capsella grandiflora
Cagra.1504s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold1504: 205846-207845 Capsella grandiflora
Cagra.1504s0059 5.0kb upstream 5.0kb upstream 7289 true Scaffold1504: 198557-205845 Capsella grandiflora
Cagra.1504s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold1504: 198557-203556 Capsella grandiflora
Cagra.1504s0059 5.0kb downstream 5.0kb downstream 7289 true Scaffold1504: 203557-210845 Capsella grandiflora
Cagra.1504s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold1504: 205846-210845 Capsella grandiflora
Cagra.1504s0059 10.0kb upstream 10.0kb upstream 12289 true Scaffold1504: 193557-205845 Capsella grandiflora
Cagra.1504s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold1504: 193557-203556 Capsella grandiflora
Cagra.1504s0059 10.0kb downstream 10.0kb downstream 12289 true Scaffold1504: 203557-215845 Capsella grandiflora
Cagra.1504s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold1504: 205846-215845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372039 5261 Brassicaceae View MSA
123838789 5264 Brassicales-Malvales View MSA
124338417 5266 SBM View MSA
124240620 5268 Malvidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain