Gene : Cagra.1504s0067 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12360 - NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 Genomic Order:  67
Name:  ? Cagra.1504s0067 Secondary Identifier:  ? PAC:28910288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1504s0067 0.5kb upstream 0.5kb upstream 5230 true Scaffold1504: 227208-232437 Capsella grandiflora
Cagra.1504s0067 0.5kb upstream 0.5kb upstream 500 false Scaffold1504: 231938-232437 Capsella grandiflora
Cagra.1504s0067 0.5kb downstream 0.5kb downstream 5230 true Scaffold1504: 226708-231937 Capsella grandiflora
Cagra.1504s0067 0.5kb downstream 0.5kb downstream 500 false Scaffold1504: 226708-227207 Capsella grandiflora
Cagra.1504s0067 1.0kb upstream 1.0kb upstream 5730 true Scaffold1504: 227208-232937 Capsella grandiflora
Cagra.1504s0067 1.0kb upstream 1.0kb upstream 1000 false Scaffold1504: 231938-232937 Capsella grandiflora
Cagra.1504s0067 1.0kb downstream 1.0kb downstream 5730 true Scaffold1504: 226208-231937 Capsella grandiflora
Cagra.1504s0067 1.0kb downstream 1.0kb downstream 1000 false Scaffold1504: 226208-227207 Capsella grandiflora
Cagra.1504s0067 2.0kb upstream 2.0kb upstream 6730 true Scaffold1504: 227208-233937 Capsella grandiflora
Cagra.1504s0067 2.0kb upstream 2.0kb upstream 2000 false Scaffold1504: 231938-233937 Capsella grandiflora
Cagra.1504s0067 2.0kb downstream 2.0kb downstream 6730 true Scaffold1504: 225208-231937 Capsella grandiflora
Cagra.1504s0067 2.0kb downstream 2.0kb downstream 2000 false Scaffold1504: 225208-227207 Capsella grandiflora
Cagra.1504s0067 5.0kb upstream 5.0kb upstream 9730 true Scaffold1504: 227208-236937 Capsella grandiflora
Cagra.1504s0067 5.0kb upstream 5.0kb upstream 5000 false Scaffold1504: 231938-236937 Capsella grandiflora
Cagra.1504s0067 5.0kb downstream 5.0kb downstream 9730 true Scaffold1504: 222208-231937 Capsella grandiflora
Cagra.1504s0067 5.0kb downstream 5.0kb downstream 5000 false Scaffold1504: 222208-227207 Capsella grandiflora
Cagra.1504s0067 10.0kb upstream 10.0kb upstream 14730 true Scaffold1504: 227208-241937 Capsella grandiflora
Cagra.1504s0067 10.0kb upstream 10.0kb upstream 10000 false Scaffold1504: 231938-241937 Capsella grandiflora
Cagra.1504s0067 10.0kb downstream 10.0kb downstream 14730 true Scaffold1504: 217208-231937 Capsella grandiflora
Cagra.1504s0067 10.0kb downstream 10.0kb downstream 10000 false Scaffold1504: 217208-227207 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026176 5273 Angiosperm View MSA
122360969 5261 Brassicaceae View MSA
123830902 5264 Brassicales-Malvales View MSA
124345642 5266 SBM View MSA
124238578 5268 Malvidae View MSA
124060925 5270 Rosid View MSA
123752951 5271 Pentapetalae View MSA
122790883 5272 Eudicot View MSA
123429147 5275 Viridiplantae View MSA
121347661 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain