Gene : Cagra.1504s0064 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  64
Name:  ? Cagra.1504s0064 Secondary Identifier:  ? PAC:28910283
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5695 Capsella grandiflora pathologic  
Cgrandiflora PWY-6608 Capsella grandiflora pathologic  
Cgrandiflora PWY-6609 Capsella grandiflora pathologic  
Cgrandiflora PWY-7179 Capsella grandiflora pathologic  
Cgrandiflora SALVADEHYPOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1504s0064 0.5kb upstream 0.5kb upstream 3382 true Scaffold1504: 218850-222231 Capsella grandiflora
Cagra.1504s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold1504: 218850-219349 Capsella grandiflora
Cagra.1504s0064 0.5kb downstream 0.5kb downstream 3382 true Scaffold1504: 219350-222731 Capsella grandiflora
Cagra.1504s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold1504: 222232-222731 Capsella grandiflora
Cagra.1504s0064 1.0kb upstream 1.0kb upstream 3882 true Scaffold1504: 218350-222231 Capsella grandiflora
Cagra.1504s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold1504: 218350-219349 Capsella grandiflora
Cagra.1504s0064 1.0kb downstream 1.0kb downstream 3882 true Scaffold1504: 219350-223231 Capsella grandiflora
Cagra.1504s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold1504: 222232-223231 Capsella grandiflora
Cagra.1504s0064 2.0kb upstream 2.0kb upstream 4882 true Scaffold1504: 217350-222231 Capsella grandiflora
Cagra.1504s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold1504: 217350-219349 Capsella grandiflora
Cagra.1504s0064 2.0kb downstream 2.0kb downstream 4882 true Scaffold1504: 219350-224231 Capsella grandiflora
Cagra.1504s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold1504: 222232-224231 Capsella grandiflora
Cagra.1504s0064 5.0kb upstream 5.0kb upstream 7882 true Scaffold1504: 214350-222231 Capsella grandiflora
Cagra.1504s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold1504: 214350-219349 Capsella grandiflora
Cagra.1504s0064 5.0kb downstream 5.0kb downstream 7882 true Scaffold1504: 219350-227231 Capsella grandiflora
Cagra.1504s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold1504: 222232-227231 Capsella grandiflora
Cagra.1504s0064 10.0kb upstream 10.0kb upstream 12882 true Scaffold1504: 209350-222231 Capsella grandiflora
Cagra.1504s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold1504: 209350-219349 Capsella grandiflora
Cagra.1504s0064 10.0kb downstream 10.0kb downstream 12882 true Scaffold1504: 219350-232231 Capsella grandiflora
Cagra.1504s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold1504: 222232-232231 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain