Gene : Cagra.1508s0022 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11759:SF8 - 30S RIBOSOMAL PROTEIN S11-RELATED Genomic Order:  22
Name:  ? Cagra.1508s0022 Secondary Identifier:  ? PAC:28905791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0022 0.5kb upstream 0.5kb upstream 2199 true Scaffold1508: 90241-92439 Capsella grandiflora
Cagra.1508s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 90241-90740 Capsella grandiflora
Cagra.1508s0022 0.5kb downstream 0.5kb downstream 2199 true Scaffold1508: 90741-92939 Capsella grandiflora
Cagra.1508s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 92440-92939 Capsella grandiflora
Cagra.1508s0022 1.0kb upstream 1.0kb upstream 2699 true Scaffold1508: 89741-92439 Capsella grandiflora
Cagra.1508s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 89741-90740 Capsella grandiflora
Cagra.1508s0022 1.0kb downstream 1.0kb downstream 2699 true Scaffold1508: 90741-93439 Capsella grandiflora
Cagra.1508s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 92440-93439 Capsella grandiflora
Cagra.1508s0022 2.0kb upstream 2.0kb upstream 3699 true Scaffold1508: 88741-92439 Capsella grandiflora
Cagra.1508s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 88741-90740 Capsella grandiflora
Cagra.1508s0022 2.0kb downstream 2.0kb downstream 3699 true Scaffold1508: 90741-94439 Capsella grandiflora
Cagra.1508s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 92440-94439 Capsella grandiflora
Cagra.1508s0022 5.0kb upstream 5.0kb upstream 6699 true Scaffold1508: 85741-92439 Capsella grandiflora
Cagra.1508s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 85741-90740 Capsella grandiflora
Cagra.1508s0022 5.0kb downstream 5.0kb downstream 6699 true Scaffold1508: 90741-97439 Capsella grandiflora
Cagra.1508s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 92440-97439 Capsella grandiflora
Cagra.1508s0022 10.0kb upstream 10.0kb upstream 11699 true Scaffold1508: 80741-92439 Capsella grandiflora
Cagra.1508s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 80741-90740 Capsella grandiflora
Cagra.1508s0022 10.0kb downstream 10.0kb downstream 11699 true Scaffold1508: 90741-102439 Capsella grandiflora
Cagra.1508s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 92440-102439 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373958 5261 Brassicaceae View MSA
123833324 5264 Brassicales-Malvales View MSA
124348983 5266 SBM View MSA
124249427 5268 Malvidae View MSA
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain