Gene : Cagra.1508s0016 C. grandiflora v1.1
Defline:  (1 of 1) 3.6.1.31 - Phosphoribosyl-ATP diphosphatase / Phosphoribosyladenosine triphosphate pyrophosphatase Genomic Order:  16
Name:  ? Cagra.1508s0016 Secondary Identifier:  ? PAC:28905864
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora HISTSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0016 0.5kb upstream 0.5kb upstream 2870 true Scaffold1508: 71704-74573 Capsella grandiflora
Cagra.1508s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 71704-72203 Capsella grandiflora
Cagra.1508s0016 0.5kb downstream 0.5kb downstream 2870 true Scaffold1508: 72204-75073 Capsella grandiflora
Cagra.1508s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 74574-75073 Capsella grandiflora
Cagra.1508s0016 1.0kb upstream 1.0kb upstream 3370 true Scaffold1508: 71204-74573 Capsella grandiflora
Cagra.1508s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 71204-72203 Capsella grandiflora
Cagra.1508s0016 1.0kb downstream 1.0kb downstream 3370 true Scaffold1508: 72204-75573 Capsella grandiflora
Cagra.1508s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 74574-75573 Capsella grandiflora
Cagra.1508s0016 2.0kb upstream 2.0kb upstream 4370 true Scaffold1508: 70204-74573 Capsella grandiflora
Cagra.1508s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 70204-72203 Capsella grandiflora
Cagra.1508s0016 2.0kb downstream 2.0kb downstream 4370 true Scaffold1508: 72204-76573 Capsella grandiflora
Cagra.1508s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 74574-76573 Capsella grandiflora
Cagra.1508s0016 5.0kb upstream 5.0kb upstream 7370 true Scaffold1508: 67204-74573 Capsella grandiflora
Cagra.1508s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 67204-72203 Capsella grandiflora
Cagra.1508s0016 5.0kb downstream 5.0kb downstream 7370 true Scaffold1508: 72204-79573 Capsella grandiflora
Cagra.1508s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 74574-79573 Capsella grandiflora
Cagra.1508s0016 10.0kb upstream 10.0kb upstream 12370 true Scaffold1508: 62204-74573 Capsella grandiflora
Cagra.1508s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 62204-72203 Capsella grandiflora
Cagra.1508s0016 10.0kb downstream 10.0kb downstream 12370 true Scaffold1508: 72204-84573 Capsella grandiflora
Cagra.1508s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 74574-84573 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373728 5261 Brassicaceae View MSA
123839923 5264 Brassicales-Malvales View MSA
124337833 5266 SBM View MSA
124254023 5268 Malvidae View MSA
124060953 5270 Rosid View MSA
123746626 5271 Pentapetalae View MSA
122789417 5272 Eudicot View MSA
122047358 5273 Angiosperm View MSA
121345826 5274 Embryophyte View MSA
123423910 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain