Gene : Cagra.1429s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24078//PTHR24078:SF208 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  4
Name:  ? Cagra.1429s0004 Secondary Identifier:  ? PAC:28919930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1429s0004 0.5kb upstream 0.5kb upstream 3175 true Scaffold1429: 12427-15601 Capsella grandiflora
Cagra.1429s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1429: 15102-15601 Capsella grandiflora
Cagra.1429s0004 0.5kb downstream 0.5kb downstream 3175 true Scaffold1429: 11927-15101 Capsella grandiflora
Cagra.1429s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1429: 11927-12426 Capsella grandiflora
Cagra.1429s0004 1.0kb upstream 1.0kb upstream 3675 true Scaffold1429: 12427-16101 Capsella grandiflora
Cagra.1429s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1429: 15102-16101 Capsella grandiflora
Cagra.1429s0004 1.0kb downstream 1.0kb downstream 3675 true Scaffold1429: 11427-15101 Capsella grandiflora
Cagra.1429s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1429: 11427-12426 Capsella grandiflora
Cagra.1429s0004 2.0kb upstream 2.0kb upstream 4675 true Scaffold1429: 12427-17101 Capsella grandiflora
Cagra.1429s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1429: 15102-17101 Capsella grandiflora
Cagra.1429s0004 2.0kb downstream 2.0kb downstream 4675 true Scaffold1429: 10427-15101 Capsella grandiflora
Cagra.1429s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1429: 10427-12426 Capsella grandiflora
Cagra.1429s0004 5.0kb upstream 5.0kb upstream 7675 true Scaffold1429: 12427-20101 Capsella grandiflora
Cagra.1429s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1429: 15102-20101 Capsella grandiflora
Cagra.1429s0004 5.0kb downstream 5.0kb downstream 7675 true Scaffold1429: 7427-15101 Capsella grandiflora
Cagra.1429s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1429: 7427-12426 Capsella grandiflora
Cagra.1429s0004 10.0kb upstream 10.0kb upstream 12675 true Scaffold1429: 12427-25101 Capsella grandiflora
Cagra.1429s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1429: 15102-25101 Capsella grandiflora
Cagra.1429s0004 10.0kb downstream 10.0kb downstream 12675 true Scaffold1429: 2427-15101 Capsella grandiflora
Cagra.1429s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1429: 2427-12426 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367874 5261 Brassicaceae View MSA
123799437 5264 Brassicales-Malvales View MSA
124296958 5266 SBM View MSA
124253340 5268 Malvidae View MSA
124073950 5270 Rosid View MSA
123751687 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain