Gene : Cagra.1443s0013 C. grandiflora v1.1
Defline:  (1 of 1) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  13
Name:  ? Cagra.1443s0013 Secondary Identifier:  ? PAC:28897786
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-622 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1443s0013 0.5kb upstream 0.5kb upstream 3818 true Scaffold1443: 49896-53713 Capsella grandiflora
Cagra.1443s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1443: 49896-50395 Capsella grandiflora
Cagra.1443s0013 0.5kb downstream 0.5kb downstream 3818 true Scaffold1443: 50396-54213 Capsella grandiflora
Cagra.1443s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1443: 53714-54213 Capsella grandiflora
Cagra.1443s0013 1.0kb upstream 1.0kb upstream 4318 true Scaffold1443: 49396-53713 Capsella grandiflora
Cagra.1443s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1443: 49396-50395 Capsella grandiflora
Cagra.1443s0013 1.0kb downstream 1.0kb downstream 4318 true Scaffold1443: 50396-54713 Capsella grandiflora
Cagra.1443s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1443: 53714-54713 Capsella grandiflora
Cagra.1443s0013 2.0kb upstream 2.0kb upstream 5318 true Scaffold1443: 48396-53713 Capsella grandiflora
Cagra.1443s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1443: 48396-50395 Capsella grandiflora
Cagra.1443s0013 2.0kb downstream 2.0kb downstream 5318 true Scaffold1443: 50396-55713 Capsella grandiflora
Cagra.1443s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1443: 53714-55713 Capsella grandiflora
Cagra.1443s0013 5.0kb upstream 5.0kb upstream 8318 true Scaffold1443: 45396-53713 Capsella grandiflora
Cagra.1443s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1443: 45396-50395 Capsella grandiflora
Cagra.1443s0013 5.0kb downstream 5.0kb downstream 8318 true Scaffold1443: 50396-58713 Capsella grandiflora
Cagra.1443s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1443: 53714-58713 Capsella grandiflora
Cagra.1443s0013 10.0kb upstream 10.0kb upstream 13318 true Scaffold1443: 40396-53713 Capsella grandiflora
Cagra.1443s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1443: 40396-50395 Capsella grandiflora
Cagra.1443s0013 10.0kb downstream 10.0kb downstream 13318 true Scaffold1443: 50396-63713 Capsella grandiflora
Cagra.1443s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1443: 53714-63713 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374165 5261 Brassicaceae View MSA
123836370 5264 Brassicales-Malvales View MSA
124336942 5266 SBM View MSA
124254033 5268 Malvidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain