Gene : Cagra.1443s0012 C. grandiflora v1.1
Defline:  (1 of 1) PF08488//PF13947 - Wall-associated kinase (WAK) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  12
Name:  ? Cagra.1443s0012 Secondary Identifier:  ? PAC:28897780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1443s0012 0.5kb upstream 0.5kb upstream 1553 true Scaffold1443: 44907-46459 Capsella grandiflora
Cagra.1443s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1443: 44907-45406 Capsella grandiflora
Cagra.1443s0012 0.5kb downstream 0.5kb downstream 1553 true Scaffold1443: 45407-46959 Capsella grandiflora
Cagra.1443s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1443: 46460-46959 Capsella grandiflora
Cagra.1443s0012 1.0kb upstream 1.0kb upstream 2053 true Scaffold1443: 44407-46459 Capsella grandiflora
Cagra.1443s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1443: 44407-45406 Capsella grandiflora
Cagra.1443s0012 1.0kb downstream 1.0kb downstream 2053 true Scaffold1443: 45407-47459 Capsella grandiflora
Cagra.1443s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1443: 46460-47459 Capsella grandiflora
Cagra.1443s0012 2.0kb upstream 2.0kb upstream 3053 true Scaffold1443: 43407-46459 Capsella grandiflora
Cagra.1443s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1443: 43407-45406 Capsella grandiflora
Cagra.1443s0012 2.0kb downstream 2.0kb downstream 3053 true Scaffold1443: 45407-48459 Capsella grandiflora
Cagra.1443s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1443: 46460-48459 Capsella grandiflora
Cagra.1443s0012 5.0kb upstream 5.0kb upstream 6053 true Scaffold1443: 40407-46459 Capsella grandiflora
Cagra.1443s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1443: 40407-45406 Capsella grandiflora
Cagra.1443s0012 5.0kb downstream 5.0kb downstream 6053 true Scaffold1443: 45407-51459 Capsella grandiflora
Cagra.1443s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1443: 46460-51459 Capsella grandiflora
Cagra.1443s0012 10.0kb upstream 10.0kb upstream 11053 true Scaffold1443: 35407-46459 Capsella grandiflora
Cagra.1443s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1443: 35407-45406 Capsella grandiflora
Cagra.1443s0012 10.0kb downstream 10.0kb downstream 11053 true Scaffold1443: 45407-56459 Capsella grandiflora
Cagra.1443s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1443: 46460-56459 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332594 5261 Brassicaceae Singleton cluster - no MSA
123838144 5264 Brassicales-Malvales View MSA
124322404 5266 SBM View MSA
124254598 5268 Malvidae View MSA
124074660 5270 Rosid View MSA
123751004 5271 Pentapetalae View MSA
122794811 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain