Gene : Cagra.1451s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Genomic Order:  4
Name:  ? Cagra.1451s0004 Secondary Identifier:  ? PAC:28916123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1451s0004 0.5kb upstream 0.5kb upstream 3895 true Scaffold1451: 9469-13363 Capsella grandiflora
Cagra.1451s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1451: 9469-9968 Capsella grandiflora
Cagra.1451s0004 0.5kb downstream 0.5kb downstream 3895 true Scaffold1451: 9969-13863 Capsella grandiflora
Cagra.1451s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1451: 13364-13863 Capsella grandiflora
Cagra.1451s0004 1.0kb upstream 1.0kb upstream 4395 true Scaffold1451: 8969-13363 Capsella grandiflora
Cagra.1451s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1451: 8969-9968 Capsella grandiflora
Cagra.1451s0004 1.0kb downstream 1.0kb downstream 4395 true Scaffold1451: 9969-14363 Capsella grandiflora
Cagra.1451s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1451: 13364-14363 Capsella grandiflora
Cagra.1451s0004 2.0kb upstream 2.0kb upstream 5395 true Scaffold1451: 7969-13363 Capsella grandiflora
Cagra.1451s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1451: 7969-9968 Capsella grandiflora
Cagra.1451s0004 2.0kb downstream 2.0kb downstream 5395 true Scaffold1451: 9969-15363 Capsella grandiflora
Cagra.1451s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1451: 13364-15363 Capsella grandiflora
Cagra.1451s0004 5.0kb upstream 5.0kb upstream 8395 true Scaffold1451: 4969-13363 Capsella grandiflora
Cagra.1451s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1451: 4969-9968 Capsella grandiflora
Cagra.1451s0004 5.0kb downstream 5.0kb downstream 8395 true Scaffold1451: 9969-18363 Capsella grandiflora
Cagra.1451s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1451: 13364-18363 Capsella grandiflora
Cagra.1451s0004 10.0kb upstream 10.0kb upstream 13363 true Scaffold1451: 1-13363 Capsella grandiflora
Cagra.1451s0004 10.0kb upstream 10.0kb upstream 9968 false Scaffold1451: 1-9968 Capsella grandiflora
Cagra.1451s0004 10.0kb downstream 10.0kb downstream 13395 true Scaffold1451: 9969-23363 Capsella grandiflora
Cagra.1451s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1451: 13364-23363 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370163 5261 Brassicaceae View MSA
123830198 5264 Brassicales-Malvales View MSA
124346526 5266 SBM View MSA
124243037 5268 Malvidae View MSA
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain