Gene : Cagra.1451s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19856:SF0 - WD REPEAT-CONTAINING PROTEIN 1 Genomic Order:  13
Name:  ? Cagra.1451s0013 Secondary Identifier:  ? PAC:28916126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1451s0013 0.5kb upstream 0.5kb upstream 3017 true Scaffold1451: 36370-39386 Capsella grandiflora
Cagra.1451s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1451: 38887-39386 Capsella grandiflora
Cagra.1451s0013 0.5kb downstream 0.5kb downstream 3017 true Scaffold1451: 35870-38886 Capsella grandiflora
Cagra.1451s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1451: 35870-36369 Capsella grandiflora
Cagra.1451s0013 1.0kb upstream 1.0kb upstream 3517 true Scaffold1451: 36370-39886 Capsella grandiflora
Cagra.1451s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1451: 38887-39886 Capsella grandiflora
Cagra.1451s0013 1.0kb downstream 1.0kb downstream 3517 true Scaffold1451: 35370-38886 Capsella grandiflora
Cagra.1451s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1451: 35370-36369 Capsella grandiflora
Cagra.1451s0013 2.0kb upstream 2.0kb upstream 4517 true Scaffold1451: 36370-40886 Capsella grandiflora
Cagra.1451s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1451: 38887-40886 Capsella grandiflora
Cagra.1451s0013 2.0kb downstream 2.0kb downstream 4517 true Scaffold1451: 34370-38886 Capsella grandiflora
Cagra.1451s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1451: 34370-36369 Capsella grandiflora
Cagra.1451s0013 5.0kb upstream 5.0kb upstream 7517 true Scaffold1451: 36370-43886 Capsella grandiflora
Cagra.1451s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1451: 38887-43886 Capsella grandiflora
Cagra.1451s0013 5.0kb downstream 5.0kb downstream 7517 true Scaffold1451: 31370-38886 Capsella grandiflora
Cagra.1451s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1451: 31370-36369 Capsella grandiflora
Cagra.1451s0013 10.0kb upstream 10.0kb upstream 12517 true Scaffold1451: 36370-48886 Capsella grandiflora
Cagra.1451s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1451: 38887-48886 Capsella grandiflora
Cagra.1451s0013 10.0kb downstream 10.0kb downstream 12517 true Scaffold1451: 26370-38886 Capsella grandiflora
Cagra.1451s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1451: 26370-36369 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363472 5261 Brassicaceae View MSA
123833521 5264 Brassicales-Malvales View MSA
124337019 5266 SBM View MSA
124248768 5268 Malvidae View MSA
124037308 5270 Rosid View MSA
123741573 5271 Pentapetalae View MSA
122790877 5272 Eudicot View MSA
122044003 5273 Angiosperm View MSA
121344306 5274 Embryophyte View MSA
123425360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain