Gene : Cagra.1451s0018 C. grandiflora v1.1
Defline:  (1 of 15) PF03547 - Membrane transport protein (Mem_trans) Genomic Order:  18
Name:  ? Cagra.1451s0018 Secondary Identifier:  ? PAC:28916121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1451s0018 0.5kb upstream 0.5kb upstream 3681 true Scaffold1451: 56277-59957 Capsella grandiflora
Cagra.1451s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1451: 59458-59957 Capsella grandiflora
Cagra.1451s0018 0.5kb downstream 0.5kb downstream 3681 true Scaffold1451: 55777-59457 Capsella grandiflora
Cagra.1451s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1451: 55777-56276 Capsella grandiflora
Cagra.1451s0018 1.0kb upstream 1.0kb upstream 4181 true Scaffold1451: 56277-60457 Capsella grandiflora
Cagra.1451s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1451: 59458-60457 Capsella grandiflora
Cagra.1451s0018 1.0kb downstream 1.0kb downstream 4181 true Scaffold1451: 55277-59457 Capsella grandiflora
Cagra.1451s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1451: 55277-56276 Capsella grandiflora
Cagra.1451s0018 2.0kb upstream 2.0kb upstream 5181 true Scaffold1451: 56277-61457 Capsella grandiflora
Cagra.1451s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1451: 59458-61457 Capsella grandiflora
Cagra.1451s0018 2.0kb downstream 2.0kb downstream 5181 true Scaffold1451: 54277-59457 Capsella grandiflora
Cagra.1451s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1451: 54277-56276 Capsella grandiflora
Cagra.1451s0018 5.0kb upstream 5.0kb upstream 7064 true Scaffold1451: 56277-63340 Capsella grandiflora
Cagra.1451s0018 5.0kb upstream 5.0kb upstream 3883 false Scaffold1451: 59458-63340 Capsella grandiflora
Cagra.1451s0018 5.0kb downstream 5.0kb downstream 8181 true Scaffold1451: 51277-59457 Capsella grandiflora
Cagra.1451s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1451: 51277-56276 Capsella grandiflora
Cagra.1451s0018 10.0kb upstream 10.0kb upstream 7064 true Scaffold1451: 56277-63340 Capsella grandiflora
Cagra.1451s0018 10.0kb upstream 10.0kb upstream 3883 false Scaffold1451: 59458-63340 Capsella grandiflora
Cagra.1451s0018 10.0kb downstream 10.0kb downstream 13181 true Scaffold1451: 46277-59457 Capsella grandiflora
Cagra.1451s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1451: 46277-56276 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364319 5261 Brassicaceae View MSA
123798727 5264 Brassicales-Malvales View MSA
124349700 5266 SBM View MSA
124250518 5268 Malvidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain