Gene : Cagra.1472s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  7
Name:  ? Cagra.1472s0007 Secondary Identifier:  ? PAC:28904809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1472s0007 0.5kb upstream 0.5kb upstream 2457 true Scaffold1472: 20028-22484 Capsella grandiflora
Cagra.1472s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1472: 20028-20527 Capsella grandiflora
Cagra.1472s0007 0.5kb downstream 0.5kb downstream 2457 true Scaffold1472: 20528-22984 Capsella grandiflora
Cagra.1472s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1472: 22485-22984 Capsella grandiflora
Cagra.1472s0007 1.0kb upstream 1.0kb upstream 2957 true Scaffold1472: 19528-22484 Capsella grandiflora
Cagra.1472s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1472: 19528-20527 Capsella grandiflora
Cagra.1472s0007 1.0kb downstream 1.0kb downstream 2957 true Scaffold1472: 20528-23484 Capsella grandiflora
Cagra.1472s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1472: 22485-23484 Capsella grandiflora
Cagra.1472s0007 2.0kb upstream 2.0kb upstream 3957 true Scaffold1472: 18528-22484 Capsella grandiflora
Cagra.1472s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1472: 18528-20527 Capsella grandiflora
Cagra.1472s0007 2.0kb downstream 2.0kb downstream 3957 true Scaffold1472: 20528-24484 Capsella grandiflora
Cagra.1472s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1472: 22485-24484 Capsella grandiflora
Cagra.1472s0007 5.0kb upstream 5.0kb upstream 6957 true Scaffold1472: 15528-22484 Capsella grandiflora
Cagra.1472s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1472: 15528-20527 Capsella grandiflora
Cagra.1472s0007 5.0kb downstream 5.0kb downstream 6957 true Scaffold1472: 20528-27484 Capsella grandiflora
Cagra.1472s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1472: 22485-27484 Capsella grandiflora
Cagra.1472s0007 10.0kb upstream 10.0kb upstream 11957 true Scaffold1472: 10528-22484 Capsella grandiflora
Cagra.1472s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1472: 10528-20527 Capsella grandiflora
Cagra.1472s0007 10.0kb downstream 10.0kb downstream 11957 true Scaffold1472: 20528-32484 Capsella grandiflora
Cagra.1472s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1472: 22485-32484 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370668 5261 Brassicaceae View MSA
123840957 5264 Brassicales-Malvales View MSA
124348245 5266 SBM View MSA
124247355 5268 Malvidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain